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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2yo1A_ | PDB header: membrane protein | Chain: A: PDB Molecule: general control protein gcn4, putative inner membrane | PDBTitle: salmonella enterica sada 1049-1304 fused to gcn4 adaptors2 (sadak9-cfii) |
Added to library: Thu Jan 10 04:07:53 2013 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | K | Y | Y | H | A | N | S | T | E | E | D | S | L | A | V | G | T | D | S | L | A | M | G | A | K | T | I | V | N | A | D | A | G | I | G | I | G | L | N | T | L | V | M | A | D | A | I | N | G | I | A | I | G | S | N | A | R | A | N | H | A | N | S | I | A | M | G | N | G | S |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | ![]() | ![]() | S | T | T | B | S | T | T | ![]() | ![]() | S | T | T | ![]() | ![]() | B | S | T | T | ![]() | ![]() | S | S | T | T | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | S | T | T | B | ![]() | ![]() | S | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | Q | T | T | R | G | A | Q | T | D | Y | T | A | Y | N | M | D | T | P | Q | N | S | V | G | E | F | S | V | G | S | E | D | G | Q | R | Q | I | T | N | V | A | A | G | S | A | D | T | D | A | V | N | V | G | Q | L | K | V | T | D | A | Q | V | S | R | N | T | Q | S | I | T | N |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | S | S | ![]() | ![]() | ![]() | ![]() | T | T | S | S | ![]() | ![]() | ![]() | S | B | S | S | B | T | T | B | S | S | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | L | N | T | Q | V | S | N | L | D | T | R | V | T | N | I | E | N | G | I | G | D | I | V | T | T | G | S | T | K | Y | F | K | T | N | T | D | G | A | D | A | N | A | Q | G | A | D | S | V | A | I | G | S | G | S | I | A | A | A | E | N | S | V | A | L | G | T | N | S | V | A |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | B | T | T | B | S | S | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . |
Sequence | D | E | A | N | T | V | S | V | G | S | S | T | Q | Q | R | R | I | T | N | V | A | A | G | V | N | N | T | D | A | V | N | V | A | Q | M | K | Q | I | E | D | K | I | E | E | I | L | S | K | I | Y | H | I | E | N | E | I | A | R | I | K | K | L | I | |||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | ![]() | ![]() | S | S | S | S | S | S | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T |
Download: | PDB structure | FASTA sequence |
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