PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2ynqD_

Fold library id	PDB Header	Molecule	Title
c2ynqD_	PDB header: membrane protein	Chain: D: PDB Molecule: essb;	PDBTitle: crystal structure of geobacillus thermodenitrificans essb2 extracellular fragment

Links to external resources
Added to library: Thu Jan 10 02:46:27 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T A Q P K Q E A Y I Q S T E L F L Q N K Y S D V I T T L E D Y A P E D M P Y V I Q Y E L A S S Y V M T E S L T E E Q R Q T V S N N I T L K T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T S
G G G S
T S
S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D E Q Y M L Y W I Y I G R S Q S E E A L E L A R T I E D R D L I V Y A L L K Y R E Q I K G D T D L S G D E K Q K K L D E I D Q E I K E Y E R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T
S S S

. . . . . . . . . 150 .

Sequence E R K E S E A Q L E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	A	Q	P	K	Q	E	A	Y	I	Q	S	T	E	L	F	L	Q	N	K	Y	S	D	V	I	T	T	L	E	D	Y	A	P	E	D	M	P	Y	V	I	Q	Y	E	L	A	S	S	Y	V	M	T	E	S	L	T	E	E	Q	R	Q	T	V	S	N	N	I	T	L	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	T										T	T	S		G	G	G	S															T	S										S						T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	E	Q	Y	M	L	Y	W	I	Y	I	G	R	S	Q	S	E	E	A	L	E	L	A	R	T	I	E	D	R	D	L	I	V	Y	A	L	L	K	Y	R	E	Q	I	K	G	D	T	D	L	S	G	D	E	K	Q	K	K	L	D	E	I	D	Q	E	I	K	E	Y	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T													T																				S	S	S
	.	.	.	.	.	.	.	.	.	150	.
Sequence	E	R	K	E	S	E	A	Q	L	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T