Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2ynmD_

Fold library idPDB HeaderMoleculeTitle
c2ynmD_PDB header: oxidoreductaseChain: D: PDB Molecule: light-independent protochlorophyllide reductase subunit b;PDBTitle: structure of the adpxalf3-stabilized transition state of the2 nitrogenase-like dark-operative protochlorophyllide oxidoreductase3 complex from prochlorococcus marinus with its substrate4 protochlorophyllide a


Added to library: Mon Feb 4 12:17:27 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MELTLWTYEGPPHIGAMRIATSMKGLHYVLHAPQGDTYADLLFTMIERRGSRPPVTYTTFQARDLGGDTA
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)



SS
SS

SSS
BTTGGGGTTS

SS

S

B
GGGGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ELVKGHIFEAVERFKPEALLVGESCTAELIQDQPGSLAKGMGLNIPIVSLELPAYSKKENWGASETFYQL
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)

S



TTTT
SS




TTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence IRGLLKEIQSWQEEGRRPRVNLLGPSLLGFRCRDDVLEIQKILGENGIDINVIAPLGASPSDLMRLPKAD
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) TT

T





TTSSSTT
STT

TTGGGSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ANVCLYPEIAESTCLWLERNFKTPFTKVVPIGVKATQDFLEELYELLGMEVSNSDQSKLPWYSKSVDSNY
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) S








ST




GGGSSSGGGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LTGKRVFIFGDGTHVLAAARIANEELGFEVVGIGTYSREMARKVRAAATELGLEALITNDYLEVEESIKE
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) GTT

SSTS

S
GGGTT





 .........360.........370.........380.........390.........400.........410.........420
Sequence CAPELVLGTQMERHSAKRLGIPCAVISTPMHVQDVPARYSPQMGWEGANVIFDDWVHPLMMGLEEHLIGM
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP)

S
T


SSS

GGGS
SS


SSTTS

 .........430.........440.........450.........460.........470.........480........
Sequence FRHDFEFTDGHQSHLGHLIHWTSEGESELAKIPFFVRGKVRRNTEKYARQAGCREIDGETLLDAKAHF
Predicted secondary structure
































SS confidence



































































Known secondary structure (DSSP)



SSS
TT

GGG






TS
GGGSS

S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D