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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2yn5B_

Fold library idPDB HeaderMoleculeTitle
c2yn5B_PDB header: membrane proteinChain: B: PDB Molecule: putative inner membrane protein;PDBTitle: structural insight into the giant calcium-binding adhesin siie:2 implications for the adhesion of salmonella enterica to polarized3 epithelial cells


Added to library: Sat Apr 6 08:35:17 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TPPNAPVVTYSDIVNDLIIMQGTAEAKSQLIITDSEGNTYTLTVPDNGKWSMAIPYPSEGKFTITSVDAI
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Known secondary structure (DSSP)





TT

TT
TTS


TTS

GGG
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GNRSDDVPLDIMKEVPVISLSPDSDSGTVGDNITRDKQPTFIIGNLESDVVVVQVDINGTVYNAEKNADG
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B









GGG

SSTTSSS
SS




TTTT

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VWFFTPGTPLADGSYTISVIASDAAGNQKNSLPITVTIDSTLTVPEIALAAGEDNGASDSDNVTNHTQPK
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SS


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TTTS
TT
SSS
S
SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence FTLQHIDADVTGVTVNVTHNGVTDIYQATQGADGWTFTPPAAWNDGNYTLSVTVVDRAGNSQQSASLAVT
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TTTT
TT

SS


STT




 ....
Sequence VDST
Predicted secondary structure


SS confidence



Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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