Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2ymbC_

Fold library idPDB HeaderMoleculeTitle
c2ymbC_PDB header: protein transportChain: C: PDB Molecule: mit domain-containing protein 1;PDBTitle: structures of mitd1


Added to library: Thu Jan 10 14:49:10 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAENIKKYL
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP)

TTTT
TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence DQEKEDGKYHKQIKIEENATGFSYESLFREYLNETVTEVWIEDPYIRHTHQLYNFLRFCEMLPCKVKTIH
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TTTTT




TTB



SSTT

TT


S


S







 .........150.........160.........170.........180.........190.........200.........210
Sequence LLTSLDEQVQQSRGLQEIEESLRSHGVLLEVQYSSSIHDREIRFNNGWMIKIGRGLDYFKKPQSRFSLGY
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)



TTT

TT



TTS
SSTT

B


SSTT
TTS
 .........220.........
Sequence CDFDLRPCHETTVDIFHKK
Predicted secondary structure









SS confidence


















Known secondary structure (DSSP) S
TTSS
B
S



Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D