Fold library entry viewer: c2yiaE_

Added to library: Sat Jul 23 09:38:41 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	I	F	N	S	P	Q	N	K	A	S	I	L	T	A	L	M	K	S	T	T	G	D	V	E	D	V	L	I	P	K	R	F	R	P	A	K	D	P	L	D	S	P	Q	A	A	A	Q	F	L	K	D	N	K	Y	R	I	L	R	P	R	A	I	P	T	M	V	E	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S															T			S	S	S				T	T	S										T	T		S											T	T			B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	D	A	A	L	P	R	L	R	Q	M	V	E	D	G	K	L	K	D	T	V	S	V	P	E	G	T	T	A	F	Y	P	K	Y	Y	P	F	H	K	P	D	H	D	E	V	G	T	F	G	A	P	D	I	T	L	L	K	Q	L	T	F	F	L	L	E	N	D	F	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G						T	T	S	S		S															B					S	S	B	T	T	B		S	S	T	T																T	S			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	P	E	T	L	R	Q	V	R	E	A	I	A	T	L	Q	Y	G	S	G	S	Y	S	G	Q	L	N	R	L	L	A	M	K	G	V	A	T	G	R	N	P	N	K	T	P	K	T	V	G	Y	T	N	E	Q	L	A	K	L	L	E	Q	T	L	P	I	N	T	P	K	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																						S	S	S									T														S							T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	D	P	D	L	R	W	A	P	S	W	L	I	N	Y	T	G	D	L	S	T	D	K	S	Y	L	P	H	V	T	I	K	S	S	A	G	L	P	Y	I	G	K	T	K	G	D	T	T	A	E	A	L	V	L	A	D	S	F	I	R	D	L	G	R	A	A	T	S	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S			B		S		G	G	G	G				S	S		T	T	T					S					T	T	S	B			T	T		T	T		B																								T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	E	A	G	V	K	K	T	I	T	D	F	W	Y	L	S	C	G	L	L	F	P	K	G	E	R	Y	T	Q	V	D	W	D	K	K	T	R	N	I	W	S	A	P	Y	P	T	H	L	L	L	S	M	V	S	T	P	V	M	N	E	S	K	L	N	I	T	N	T	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	G	G	G	G													G	G	G	T	T	T																										T					T	T	T	S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	S	L	Y	G	F	S	P	F	H	G	G	M	D	R	I	M	T	I	I	R	D	S	L	D	N	D	E	D	L	V	M	I	Y	A	D	N	I	Y	I	L	Q	D	N	T	W	Y	S	I	D	L	E	K	G	E	A	N	C	T	P	Q	H	M	Q	A	M	M	Y	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B		T	T			S	T	T	T															T	T								T	T							T	T								T	T	G	G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	T	R	G	W	T	N	E	D	G	S	P	R	Y	N	P	T	W	A	T	F	A	M	N	V	A	P	S	M	V	V	D	S	S	C	L	L	M	N	L	Q	L	K	T	Y	G	Q	G	S	G	N	A	F	T	F	L	N	N	H	L	M	S	T	I	V	V	A	E	W	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	S	B		T	T	S		B	S	B											T	T					B	S						B	T							S	B		T	T	S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	A	G	K	P	N	P	M	T	K	E	F	M	D	L	E	E	K	T	G	I	N	F	K	I	E	R	E	L	K	N	L	R	E	T	I	V	E	A	V	E	T	A	P	Q	D	G	Y	L	A	D	G	S	D	L	P	P	I	R	P	G	K	A	V	E	L	D	L	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T				T	T	S					T						T											S											T			S	S	S	T	T	T	T			S	S			S	S										T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	W	S	A	I	Y	S	R	Q	M	E	M	F	V	P	V	L	E	N	E	R	L	I	A	S	A	A	Y	P	K	G	L	E	N	K	A	L	A	R	K	P	G	A	E	I	A	Y	Q	I	V	R	Y	E	A	I	R	L	V	G	G	W	N	N	P	L	L	E	T	A	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T																	S						S	T	T	G	G	G																			T	T	G	G	G	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	H	M	S	L	D	K	R	K	R	L	E	V	K	G	I	D	V	T	G	F	L	D	D	W	N	N	M	S	E	F	G	G	D	L	E	G	I	T	L	S	E	P	L	T	N	Q	T	L	V	D	I	N	T	P	L	D	S	F	D	P	K	A	R	P	Q	T	P	R	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T									T		T	T	T		T	T		S	S	G	G	G				S	S											T			S	S				G	G	G	S				S	S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	K	K	T	L	D	E	V	T	T	A	I	T	S	G	T	Y	K	D	P	K	S	A	V	W	R	L	L	D	Q	R	T	K	L	R	V	S	T	L	R	D	Q	A	L	A	L	K	P	A	S	S	S	V	D	N	W	A	E	A	T	E	E	L	A	Q	Q	Q	Q	L	L	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												T	T	T	T	S	S		S	S										T	T	B		G	G	G														T		T	T																T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790
Sequence	K	A	N	N	L	L	K	S	S	L	T	E	T	R	E	A	L	E	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		G	G	G	B

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PDB structure

FASTA sequence

Hidden Markov model

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