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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2yevA_

Fold library idPDB HeaderMoleculeTitle
c2yevA_PDB header: electron transportChain: A: PDB Molecule: cytochrome c oxidase polypeptide i+iii;PDBTitle: structure of caa3-type cytochrome oxidase


Added to library: Sat May 26 12:23:21 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence WAVLWDLLTTVDHKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFF
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Known secondary structure (DSSP)



TTSTT

SS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence IIQAGLTGFGNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFSAQSES
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Known secondary structure (DSSP) TTTT
SS
S
GGGSTT
S

STTTT
TT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence GVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVLL
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Known secondary structure (DSSP) S
S
TT

GGGS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence ERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVASTFARKPLFGYRQMVWAQMGIVV
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Known secondary structure (DSSP)


SS
GGGT

TTS

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LGTMVWAHHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLLGG
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Known secondary structure (DSSP) TTS
GGGG
TTS


TTTS




 .........360.........370.........380.........390.........400.........410.........420
Sequence ITGVMLSMTPLDYQFHDSYFVVAHFHNVLMAGSGFGAFAGLYYWWPKMTGRMYDERLGRLHFWLFLVGYL
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Known secondary structure (DSSP) STTBTTTSB


 .........430.........440.........450.........460.........470.........480.........490
Sequence LTFLPQYALGYLGMPRRYYTYNADIAGWPELNLLSTIGAYILGLGGLVWIYTMWKSLRSGPKAPDNPWGG
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Known secondary structure (DSSP) TT
BSS
S


SSSTT

B

S
TT

 .........500.........510.........520.........530.........540.........550.........560
Sequence YTLEWLTASPPKAHNFDVKLPTEFPSERPLYDWKKKGVELKPEDPAHIHLPNSSFWPFYSAATLFAFFVA
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Known secondary structure (DSSP)
SGGGGS
SS

TTS
SB


S

SSS
TT



B

GGG






S
 .........570.........580.........590.........600.........610.........620.........630
Sequence VAALPVPNVWMWVFLALFAYGLVRWALEDEYSHPVEHHTVTGKSNAWMGMAWFIVSEVGLFAILIAGYLY
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Known secondary structure (DSSP) S
SS
TS
S
SS





SSSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence LRLSGAATPPEERPALWLALLNTFLLVSSSFTVHFAHHDLRRGRFNPFRFGLLVTIILGVLFFLVQSWEF
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Known secondary structure (DSSP) TTS



TT


T
 .........710.........720.........730.........740.........750.........760.........770
Sequence YQFYHHSSWQENLWTAAFFTIVGLHGLHVVIGGFGLILAYLQALRGKITLHNHGTLEAASMYWHLVDAVW
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Known secondary structure (DSSP) TT

TTT
T

BTTB
 .........780
Sequence LVIVTIFYVW
Predicted secondary structure

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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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