Fold library entry viewer: c2ya1A_

Added to library: Sat Apr 23 09:05:07 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	H	M	A	S	D	N	Y	F	R	I	H	V	K	K	L	P	E	E	N	K	D	A	Q	G	L	W	T	W	D	D	V	E	K	P	S	E	N	W	P	N	G	A	L	S	F	K	D	A	K	K	D	D	Y	G	Y	Y	L	D	V	K	L	K	E	Q	A	K	K	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G		T	T							S	S		S	S	S		G	G	G								S	B	S	S				S	T	T	T	T	S			G	G	G					S	S								B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	L	I	N	N	T	A	G	K	N	L	T	G	D	K	S	V	E	K	L	V	P	K	M	N	E	A	W	L	D	Q	D	Y	K	V	F	S	Y	E	P	Q	P	A	G	T	V	R	V	N	Y	Y	R	T	D	G	N	Y	D	K	K	S	L	W	Y	W	G	D	V	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T			B	S	S								S	S	T	T								T	T					S	S					T	T									T	T				T	T								S	B	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	S	S	A	Q	W	P	D	G	T	D	F	T	A	T	G	K	Y	G	R	Y	I	D	I	P	L	N	E	A	A	R	E	F	G	F	L	L	L	D	E	S	K	Q	G	D	D	V	K	I	R	K	E	N	Y	K	F	T	D	L	K	N	H	S	Q	I	F	L	K	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	T	T										T	T								B		T	T											T	T	S		G	G	G	G	B	S	S	S	S							T	T	T		S						T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	E	S	I	Y	T	N	P	Y	Y	V	H	D	I	R	M	T	G	A	Q	H	E	S	S	F	S	T	L	I	L	K	H	S	N	I	T	N	I	D	E	A	G	K	K	V	T	T	K	H	P	Y	T	V	S	Y	N	S	D	Q	F	T	T	K	T	S	W	R	L	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B	S	S	T	T				S	S												S				T	T	T							B	T	T	T	T						S							T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	T	Y	S	Y	D	G	K	L	G	A	D	L	K	E	E	G	K	Q	V	D	L	T	L	W	S	P	S	A	D	K	V	S	V	V	V	Y	D	K	N	D	P	D	K	V	V	G	T	V	A	L	E	K	G	E	R	G	T	W	K	Q	T	L	D	S	T	N	K	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S								G	G	G	T									T	T		S									S	S		T	T	S											G	G	G								T	T		S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	T	D	F	T	G	Y	Y	Y	Q	Y	Q	I	E	R	Q	G	K	T	V	L	A	L	D	P	Y	A	K	S	L	A	A	W	N	S	D	D	S	K	I	D	D	A	H	K	V	A	K	A	A	F	V	D	P	A	K	L	G	P	Q	D	L	T	Y	G	K	I	H	N	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S			T	T										T	T								T	T		S	S	B				B	G	G	G	T	T	S		G	G	G	S	S								G	G	G	S	S		T	T							T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	T	R	E	D	A	V	I	Y	E	A	H	V	R	D	F	T	S	D	P	A	I	A	K	D	L	T	K	P	F	G	T	F	E	A	F	I	E	K	L	D	Y	L	K	D	L	G	V	T	H	I	Q	L	L	P	V	L	S	Y	Y	F	V	N	E	L	K	N	H	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	G	G	G															G	G	G	T	T	T		S	S		T	T	S						T	T								T		S					S			B		B	S	S		B	G	G	G	T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	S	D	Y	A	S	S	N	S	N	Y	N	W	G	Y	D	P	Q	N	Y	F	S	L	T	G	M	Y	S	S	D	P	K	N	P	E	K	R	I	A	E	F	K	N	L	I	N	E	I	H	K	R	G	M	G	A	I	L	D	V	V	Y	N	H	T	A	K	V	D	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			S	S	S		S				S		S	B	S		S	S	S	B		S	T	T		S		T	T		T	T															T	T	T									T	T			S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	D	L	E	P	N	Y	Y	H	F	M	D	A	D	G	T	P	R	T	S	F	G	G	G	R	L	G	T	T	H	H	M	T	K	R	L	L	I	D	S	I	K	Y	L	V	D	T	Y	K	V	D	G	F	R	F	D	M	M	G	D	H	D	A	A	S	I	E	E	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	T	T	T	S	B		B		T	T			B				T	T				B		T	T	S																										T	T	G	G	G	S	B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	A	A	R	A	L	N	P	N	L	I	M	L	G	E	G	W	R	T	Y	A	G	D	E	N	M	P	T	K	A	A	D	Q	D	W	M	K	H	T	D	T	V	A	V	F	S	D	D	I	R	N	N	L	K	S	G	Y	P	N	E	G	Q	P	A	F	I	T	G	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T									S					S	T	T					B	S	S	G	G	G	G	G	G		S	S	S												S			T	T	S	T	T				T	T	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	R	D	V	N	T	I	F	K	N	L	I	A	Q	P	T	N	F	E	A	D	S	P	G	D	V	I	Q	Y	I	A	A	H	D	N	L	T	L	F	D	I	I	A	Q	S	I	K	K	D	P	S	K	A	E	N	Y	A	E	I	H	R	R	L	R	L	G	N	L	M	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T			S	S	S			S	S	G	G	G					S			S	S	S	S											T			T	T	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	T	A	Q	G	T	P	F	I	H	S	G	Q	E	Y	G	R	T	K	Q	F	R	N	P	A	Y	R	T	P	V	A	E	D	K	V	P	N	K	S	H	L	L	R	D	K	D	G	N	P	F	D	Y	P	Y	F	I	H	D	S	Y	D	S	S	D	A	V	N	K	F	D	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S	S						T	T	T	T	T	T				B				G	G	G	S	S				T	T	T			T	T							T	T	S										S			T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	T	K	A	T	D	G	K	A	Y	P	E	N	V	K	S	R	D	Y	M	K	G	L	I	A	L	R	Q	S	T	D	A	F	R	L	K	S	L	Q	D	I	K	D	R	V	H	L	I	T	V	P	G	Q	N	G	V	E	K	E	D	V	V	I	G	Y	Q	I	T	A	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T																						G	G	G	S		S												S	S		T	T	S	T	T			S			S									T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	G	D	I	Y	A	V	F	V	N	A	D	E	K	A	R	E	F	N	L	G	T	A	F	A	H	L	R	N	A	E	V	L	A	D	E	N	Q	A	G	P	V	G	I	A	N	P	K	G	L	E	W	T	E	K	G	L	K	L	N	A	L	T	A	T	V	L	R	V	S	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										S	S	S							T	T	T	T	G	G	G	G	G							S	S		B		S	S			S	S		S	S					S	S						T	T
	.
Sequence	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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