Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2y6vB_

Fold library idPDB HeaderMoleculeTitle
c2y6vB_PDB header: hydrolaseChain: B: PDB Molecule: peroxisomal membrane protein lpx1;PDBTitle: peroxisomal alpha-beta-hydrolase lpx1 (yor084w) from2 saccharomyces cerevisiae (crystal form i)


Added to library: Sat Jul 16 09:48:11 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QNRFKKETKTSASWPRAPQSTLATDRLELTYDVYTSAERRRSRTATRLNLVFLHGSGMSKVVWEYYLPRL
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)

S



SS
STTSB







S




TT


TT

GGGGGGGGGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VAADAEGNYAIDKVLLIDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATELGSIDSHPALNVVIGHSM
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)



TTT

TTSTTTTB
S







GGG
ST
 .........150.........160.........170.........180.........190.........200.........210
Sequence GGFQALACDVLQPNLFHLLILIEPVVITRKAIPPDSPQIPENLYNSLRLKTDHFANESEYVKYMRNGSFF
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)
TTS
SS


S





TT




T

SSTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TNAHSQILQNIIDFERTKGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWPPQNQ
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) TTS



SS
TTS
GGGTTTGGG

STT



 .........290.........300.........310.........320.........330.........340.........350
Sequence LFLQKTLQNYHLDVIPGGSHLVNVEAPDLVIERINHHIHEFVLTSPLQSSHIPQLTLEERAVMFDRAFDS
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)
SSTT

TTS











 ........
Sequence FKNEALVK
Predicted secondary structure

SS confidence







Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D