Fold library entry viewer: c2y3aA_

Added to library: Sat Mar 19 08:50:41 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	V	D	S	Q	I	A	S	D	G	A	I	S	V	D	F	L	L	P	T	G	I	Y	I	Q	L	E	V	P	R	E	A	T	I	S	Y	I	K	Q	M	L	W	K	Q	V	H	N	Y	P	M	F	N	L	L	M	D	I	D	S	Y	M	F	A	C	V	N	Q	T	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		S	S			S									T	T										T	T		B												G	G	G	S	T	T	T	T	S				G	G	G							B	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	E	E	L	E	D	E	T	R	R	L	C	D	V	R	P	F	L	P	V	L	K	L	V	T	R	S	C	D	P	A	E	K	L	D	S	K	I	G	V	L	I	G	K	G	L	H	E	F	D	A	L	K	D	P	E	V	N	E	F	R	R	K	M	R	K	F	S	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S	B	S	G	G	G		B	S	S	S							S				S	S		S										T	S		T					T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	I	Q	S	L	V	G	L	S	W	I	D	W	L	K	H	T	Y	P	P	E	H	E	P	S	V	L	E	N	L	E	D	K	L	Y	G	G	K	L	V	V	A	V	H	F	E	N	S	Q	D	V	F	S	F	Q	V	S	P	N	L	N	P	I	K	I	N	E	L	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T	T					S				B		T	T	G	G	G	T	S				S	S	S	S									T	T		S									T	T	S		T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	K	R	L	T	A	S	P	C	D	Y	V	L	Q	V	S	G	R	V	E	Y	V	F	G	D	H	P	L	I	Q	F	Q	Y	I	R	N	C	V	M	N	R	T	L	P	H	F	I	L	V	E	C	C	K	I	K	K	M	Y	E	Q	E	M	I	A	I	E	A	A	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G						T	T	B	S					S	S	S		G	G	G	B									T	T																									T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	W	D	N	N	N	P	F	Q	I	T	L	V	K	G	N	K	L	N	T	E	E	T	V	K	V	H	V	R	A	G	L	F	H	G	T	E	L	L	C	K	T	V	V	S	S	E	I	S	G	K	N	D	H	I	W	N	E	Q	L	E	F	D	I	N	I	C	D	L	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S																S	S						B						T	T			S	S				B						S	S	S														S	S	S			T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	M	A	R	L	C	F	A	V	Y	A	V	V	A	W	V	N	T	M	V	F	D	F	K	G	Q	L	R	S	G	D	V	I	L	H	S	W	S	S	F	P	D	E	L	E	E	M	L	N	P	M	G	T	V	Q	T	N	P	Y	A	E	N	A	T	A	L	H	I	T	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																		S	B		T	T		B	B											T	T				S			S	S	S			S	S		S	S			S			T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	N	K	K	Q	P	C	Y	Y	P	P	F	D	K	I	I	E	K	A	A	E	L	A	G	K	K	F	L	A	V	L	K	E	I	L	D	R	D	P	L	S	Q	L	C	E	N	E	M	D	L	I	W	T	L	R	Q	D	C	R	E	N	F	P	Q	S	L	P	K	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S			B				T	T												T	T							T	T	T	T	S		T	T	S													T									G	G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	S	I	K	W	N	K	L	E	D	V	A	Q	L	Q	A	L	L	Q	I	W	P	K	L	P	P	R	E	A	L	E	L	L	D	F	N	Y	P	D	Q	Y	V	R	E	Y	A	V	G	C	L	R	Q	M	S	D	E	E	L	S	Q	Y	L	L	Q	L	V	Q	V	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		T	T														T	S									G	G	G	G	S	T	T				T	T											S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Y	E	P	F	L	D	C	A	L	S	R	F	L	L	E	R	A	L	D	N	R	R	I	G	Q	F	L	F	W	H	L	R	S	E	V	H	T	P	A	V	S	V	Q	F	G	V	I	L	E	A	Y	C	R	G	S	V	G	H	M	K	V	L	S	K	Q	V	E	A	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	S												T	S		S	S														T	S																		T	T	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	L	K	T	L	N	S	L	I	K	L	N	A	V	K	L	S	R	A	K	G	K	E	A	M	H	T	C	L	K	Q	S	A	Y	R	E	A	L	S	D	L	Q	S	P	L	N	P	C	V	I	L	S	E	L	Y	V	E	K	C	K	Y	M	D	S	K	M	K	P	L	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S															S	T	T					T	S	S	S			S	S		S	S	B							G	G	G					S	S	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	V	Y	S	S	R	A	F	G	E	D	S	V	G	V	I	F	K	N	G	D	D	L	R	Q	D	M	L	T	L	Q	M	L	R	L	M	D	L	L	W	K	E	A	G	L	D	L	R	M	L	P	Y	G	C	L	A	T	G	D	R	S	G	L	I	E	V	V	S	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	S	S	S									S	S																							S														S	S	S								T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	E	T	I	A	D	I	Q	L	N	S	S	N	V	A	A	T	A	A	F	N	K	D	A	L	L	N	W	L	K	E	Y	N	S	G	D	D	L	D	R	A	I	E	E	F	T	L	S	C	A	G	Y	C	V	A	S	Y	V	L	G	I	G	D	R	H	S	D	N	I	M	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B						S	S	S		T	T	T	T	T	S		S	S	T	T												T																								T	T						T	T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	K	K	T	G	Q	L	F	H	I	D	F	G	H	I	L	G	N	F	K	S	K	F	G	I	K	R	E	R	V	P	F	I	L	T	Y	D	F	I	H	V	I	Q	Q	G	K	T	G	N	T	E	K	F	G	R	F	R	Q	C	C	E	D	A	Y	L	I	L	R	R	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S								S			S	S					G	G	G																				T	T		S	S		S	S	S	T	T																T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.
Sequence	N	L	F	I	T	L	F	A	L	M	L	T	A	G	L	P	E	L	T	S	V	K	D	I	Q	Y	L	K	D	S	L	A	L	G	K	S	E	E	E	A	L	K	Q	F	K	Q	K	F	D	E	A	L	R	E	S	W	T	T	K	V	N	W	M	A	H	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	S	T	T			S	S		S	S											T	T		S	S																			T										S

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PDB structure

FASTA sequence

Hidden Markov model

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