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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2y38A_ | PDB header: structural protein | Chain: A: PDB Molecule: laminin subunit alpha-5; | PDBTitle: laminin alpha5 chain n-terminal fragment |
Added to library: Sat Feb 26 08:56:04 2011 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | G | F | S | L | H | P | P | Y | F | N | L | A | E | G | A | R | I | T | A | S | A | T | C | H | P | V | S | N | A | I | D | G | T | E | R | W | W | Q | S | P | P | L | S | R | G | L | E | Y | N | E | V | N | V | T | L | D | L | G | Q | V | F | H | V | A | Y | V | L | I | K | F |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | S | S | G | G | G | T | T | S | S | S | S | ![]() | ![]() | S | T | T | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | A | N | S | P | R | P | D | L | W | V | L | E | R | S | T | D | F | G | H | T | Y | Q | P | W | Q | F | F | A | S | S | K | R | D | C | L | E | R | F | G | P | R | T | L | E | R | I | T | Q | D | D | D | V | I | C | T | T | E | Y | S | R | I | V | P | L | E | N | G | E | I | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | T | S | S | T | T | ![]() | ![]() | S | T | T | S | S | S | S | S | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | V | S | L | V | N | G | R | P | G | A | L | N | F | S | Y | S | P | L | L | R | D | F | T | K | A | T | N | I | R | L | R | F | L | R | T | N | T | L | L | G | H | L | M | G | K | A | L | R | D | P | T | V | T | R | R | Y | Y | Y | S | I | K | D | I | S | I | G | G | R | C | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | S | S | S | S | S | G | G | G | T | T | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence | C | H | G | H | A | D | V | C | D | A | K | D | P | L | D | P | F | R | L | Q | C | A | C | Q | H | N | T | C | G | G | S | C | D | R | C | C | P | G | F | N | Q | Q | P | W | K | P | A | T | T | D | S | A | N | E | C | Q | S | C | N | C | H | G | H | A | Y | D | C | Y | Y | D |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | B | S | ![]() | ![]() | ![]() | S | T | T | S | T | T | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | S | S | S | ![]() | ![]() | T | T | S | S | S | S | T | T | S | S | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . |
Sequence | P | E | V | D | R | R | E | A | S | Q | N | Q | D | N | V | Y | Q | G | G | G | V | C | L | D | C | Q | H | H | T | T | G | I | N | C | E | R | C | L | P | G | F | F | R | A | P | D | Q | P | L | D | S | P | H | V | C | R | P | A | A | A | H | |||||||||
Predicted secondary structure | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | S | S | ![]() | ![]() | ![]() | S | S | S | S | ![]() | ![]() | S | T | T | S | ![]() | ![]() | T | T | ![]() | ![]() | T | T | S | T | T | S | T | T | S | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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