PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2xznH_

Fold library id	PDB Header	Molecule	Title
c2xznH_	PDB header: ribosome	Chain: H: PDB Molecule: ribosomal protein s8 containing protein;	PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2

Links to external resources
Added to library: Sat Jan 22 08:41:41 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V K V N I L A E C L K D L V N A E K M G K K Q V L L R P V S K V V L K F L R I M Q K N G Y I G E F E V I D D H R S K K V V V E L I G R I N K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S
S
T T S S
S S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . .

Sequence C G V I S P R Y D V P L A D F E K W T N N I L P S R Q F G N V V L T T T Y G I L T H E E C R K R H T G G K I L G F F Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
B
G G G S S S T T
S S
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	K	V	N	I	L	A	E	C	L	K	D	L	V	N	A	E	K	M	G	K	K	Q	V	L	L	R	P	V	S	K	V	V	L	K	F	L	R	I	M	Q	K	N	G	Y	I	G	E	F	E	V	I	D	D	H	R	S	K	K	V	V	V	E	L	I	G	R	I	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T		S						S															T	T	S	S									S	S	S									S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Sequence	C	G	V	I	S	P	R	Y	D	V	P	L	A	D	F	E	K	W	T	N	N	I	L	P	S	R	Q	F	G	N	V	V	L	T	T	T	Y	G	I	L	T	H	E	E	C	R	K	R	H	T	G	G	K	I	L	G	F	F	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T			B			G	G	G									S	S	S	T	T									S	S					T	T						T