Fold library entry viewer: c2xvgA_

Added to library: Sat Apr 16 08:57:08 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	L	A	Q	V	E	R	T	A	E	G	V	V	L	T	L	P	E	G	T	V	K	K	L	R	L	Q	V	M	G	E	R	I	I	R	V	T	A	L	P	G	T	D	F	G	I	V	P	E	S	I	Q	V	V	A	K	P	A	T	N	V	P	F	S	V	D	Q	A	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S							S	S	S	S											T	T								S	S	S		G	G	G	S				S	S							S	S									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	L	V	L	K	T	S	Q	V	S	A	E	V	S	L	L	D	G	T	V	S	F	R	D	A	K	G	N	V	L	L	Q	E	E	N	R	G	T	F	S	P	V	I	H	D	P	D	P	V	D	A	D	S	Y	A	L	R	Q	E	F	N	R	G	S	D	E	G	F	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S							T	T	T								T	T	S						B		S	S				B				S		S	S				T	T		B	B							T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	G	Q	H	Q	N	G	Q	V	N	Y	A	G	E	N	V	E	L	T	T	Y	N	L	V	I	S	I	P	F	L	V	S	S	R	N	Y	G	L	L	W	D	N	N	S	I	T	R	F	G	D	P	R	E	A	Q	P	L	N	Q	S	L	K	L	Y	D	A	E	G	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S			S	S		T	T	S								S	S										S	S	S									S					S	S	S	S					G	G	G	S						S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	L	T	V	R	Y	F	V	G	D	E	L	K	L	T	R	V	E	A	D	F	N	H	Q	F	Y	K	Q	G	N	E	L	E	N	P	F	P	E	E	V	A	G	A	Y	K	N	N	T	L	R	I	E	L	E	G	S	I	E	A	Q	A	T	G	K	H	Q	F	K	M	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T									S	S						B	S	S	S	S		B	S	S				G	G	G							T													S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	S	G	Y	A	Q	L	S	L	D	G	E	V	V	L	D	R	W	R	M	N	W	N	P	W	Y	H	N	F	Y	R	E	L	N	A	G	D	K	H	K	L	K	V	S	W	K	P	D	G	G	F	F	H	L	R	H	L	D	P	L	P	A	N	E	Q	H	E	L	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S								S	S	S									T	T	S												T	T												T	T													T	T	T	T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	S	E	T	G	K	A	I	D	Y	Y	F	V	A	G	D	T	K	D	D	I	I	S	G	Y	R	Q	L	T	G	K	S	V	M	L	P	K	W	A	Y	G	F	W	Q	S	R	E	R	Y	K	S	S	D	E	I	I	Q	N	L	K	E	Y	R	D	R	K	I	P	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	B	S	S									S	S																				G	G	G	G	S						T	T			S														T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	I	V	L	D	W	S	Y	W	P	E	D	A	W	G	S	H	D	F	D	K	Q	F	F	P	D	P	K	A	L	V	D	K	V	H	A	M	N	A	Q	I	M	I	S	V	W	P	K	F	Y	P	T	T	D	N	Y	K	E	L	N	A	K	G	F	M	F	N	R	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S			S		T	T		T	T	S					T	T	T		S												T	T									S				T	T	S									T	T				T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	E	K	N	L	D	W	I	G	K	G	Y	L	N	A	F	Y	D	P	F	S	P	E	A	T	A	I	F	W	K	Q	I	R	D	K	I	N	V	H	G	F	D	A	W	W	L	D	A	V	E	P	D	I	H	S	N	L	T	F	E	K	R	K	W	L	M	T	P	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T		B		S	S	T	T			B							S	S															T	G	G	G	T									T	T	T		S	S	T	T										T		S	B	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	R	G	N	G	A	E	I	F	N	A	Y	A	V	P	H	A	E	G	V	Y	Q	G	E	L	A	T	D	G	D	K	R	S	F	I	L	T	R	S	G	F	G	G	I	Q	R	T	G	S	A	I	W	S	G	D	I	V	S	R	W	S	D	M	K	D	Q	I	A	A	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	B		S	G	G	G	T	T	T	T																	T	T	B							S				T	T	G	G	G	G	S							S		B	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	T	N	L	A	G	V	T	N	W	T	F	D	I	G	G	F	T	P	E	D	R	F	R	H	G	K	K	G	F	V	G	S	W	T	A	L	D	A	E	Q	V	D	E	W	Q	E	L	N	T	R	W	Y	Q	F	G	A	F	V	P	L	Y	R	S	H	G	Q	N	P	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T								B	T		S	B									T	T					S	G	G	G	S																				T	T	S	S	S						S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	R	E	I	F	N	I	A	D	E	G	T	E	V	Y	N	A	M	V	W	Y	T	K	L	R	Y	Y	L	M	P	Y	I	Y	T	L	G	G	D	T	Y	H	K	D	G	T	I	M	R	G	L	V	M	D	F	P	N	D	R	K	A	W	D	I	N	T	Q	Y	M	F	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S					S		T	T	S																T														T				S									T	T									S					T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	A	F	L	V	N	P	V	Y	E	Y	K	A	R	S	R	D	V	Y	L	P	A	G	S	D	W	Y	N	F	Y	T	G	E	K	L	A	G	G	Q	T	I	T	A	D	A	P	L	A	R	V	P	L	F	V	K	A	G	A	I	V	P	T	G	P	L	I	Q	H	V	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								S	T	T										T	T	S					T	T	T						S	S									T	T								T	T										S	S	G	G	G
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	G	L	N	S	P	L	L	I	T	V	Y	T	G	A	N	G	S	F	D	I	Y	E	D	D	G	R	S	L	K	Y	Q	Q	G	E	W	S	R	I	P	L	S	Y	D	D	V	T	G	T	L	I	I	G	D	R	V	G	S	F	T	G	M	A	D	E	R	N	I	R	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T	T										S	S											S	S	B	S	G	G	G	G	T	B										T	T	T	T												T	T			S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.
Sequence	F	I	A	G	P	T	A	D	A	T	N	F	D	K	A	A	A	E	A	V	T	Y	T	G	K	S	V	S	I	K	R	P	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S			T	T	T	T		T	T	T	S									S	S

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PDB structure

FASTA sequence

Hidden Markov model

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