Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2xutC_

Fold library idPDB HeaderMoleculeTitle
c2xutC_PDB header: transport proteinChain: C: PDB Molecule: proton/peptide symporter family protein;PDBTitle: crystal structure of a proton dependent oligopeptide (pot)2 family transporter.


Added to library: Sat Dec 18 20:04:35 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFF
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP)

TS
SS

SSSTTTTTTTTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GKYNTILWLSLIYCVGHAFLAIFEHSVQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDM
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP)
STSS
TTT
STTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FYFTINFGSFFASLSMPLLLKNFGAAVAFGIPGVLMFVATVFFWLGRKRYIHMPVEGKGNIGLVLALIGG
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) TSTTS
SSSSS





TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VSAAYALVNIPTLGIVAGLCCAMVLVMGFVGAGASLQLERARKSHPDAAVDGVRSVLRILVLFALVTPFW
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP) TGGGTTTT
SSTGGGTS

S

SSSSTTTTTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SLFDQKASTWILQANDMVKPQWFEPAMMQALNPLLVMLLIPFNNFVTALRKMGAGIAITGLSWIVVGTIQ
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) TTTSSTTTS


SSS
TTSGGGGGGTTT


TTTTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LMMDGGSALSIFWQILPYALLTFGEVLVSATGLEFAYSQAPKAMKGTIMSFWTLSVTVGNLWVLLANVSV
Predicted secondary structure









SS confidence





































































Known secondary structure (DSSP) TTTTTT



STTT

TT

TTTGGGT
 .........430.........440.........450......
Sequence KSPTVTEQIVQTGMSVTAFQMFFFAGFAILAAIVFA
Predicted secondary structure






SS confidence



































Known secondary structure (DSSP) TS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D