PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2xssB_

Fold library id	PDB Header	Molecule	Title
c2xssB_	PDB header: hydrolase	Chain: B: PDB Molecule: cgmp-specific 3', 5'-cyclic phosphodiesterase;	PDBTitle: crystal structure of gafb from the human phosphodiesterase 5

Links to external resources
Added to library: Sat May 21 09:11:14 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E T A S L E V I L K K I A A T I I S F M Q V Q K C T I F I V D E D C S D S F S S V F H M E C E E L E K S S D T R E H D A N K I N Y M Y A Q Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S
S S
T T S
S
T S T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V K N T M E P L N I P D V S K D K R F P I R S L L C T P I K N G K K N K V I G V C Q L V N K M E E G K V K P F N R N D E Q F L E A F V I F C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
S
S T T
S S
T T S

. . . . . . . . . 150

Sequence G L G I Q N T Q M Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	T	A	S	L	E	V	I	L	K	K	I	A	A	T	I	I	S	F	M	Q	V	Q	K	C	T	I	F	I	V	D	E	D	C	S	D	S	F	S	S	V	F	H	M	E	C	E	E	L	E	K	S	S	D	T	R	E	H	D	A	N	K	I	N	Y	M	Y	A	Q	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T		S									S	S		T	T	S															S									T	S	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	K	N	T	M	E	P	L	N	I	P	D	V	S	K	D	K	R	F	P	I	R	S	L	L	C	T	P	I	K	N	G	K	K	N	K	V	I	G	V	C	Q	L	V	N	K	M	E	E	G	K	V	K	P	F	N	R	N	D	E	Q	F	L	E	A	F	V	I	F	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S					S		S	T	T		S	S														T	T	S
	.	.	.	.	.	.	.	.	.	150
Sequence	G	L	G	I	Q	N	T	Q	M	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T