PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2xpfB_

Fold library id	PDB Header	Molecule	Title
c2xpfB_	PDB header: lyase	Chain: B: PDB Molecule: 4-amino-4-deoxychorismate lyase;	PDBTitle: crystal structure of putative aminodeoxychorismate lyase2 from pseudomonas aeruginosa

Links to external resources
Added to library: Sat Sep 18 08:57:55 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L D W V D G R P A A E L S V R D R G L A Y G D G L F E T L A V R A G T P R L L E R H L A R L E E G C R R L A I P L D T A A L R Q E L L A F C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
T T B
T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A A L G D G V A K L I V T R G E G L R G Y A P P A E A S P R R I L S G S P R P A Y P E R H W Q Q G V R L F A C R T R L A E Q P L L A G L K H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B
S S S S
T T
B
T T T T B
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L N R L E Q V L A R A E W S D A G H A E G L M L D V H E R V V E G V F S N L L L V L D G T L V A P D L R R C G V A G V M R A E L L E R A E G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
T T
S B T T
S S S S S S
S S S S B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270

Sequence I G V P L A I R D V S M A E L A T A D E V F L C N S Q F G I W P V R A L D E H V W P V G E L T R K L Q D Q L R E D L D F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T
S T T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	D	W	V	D	G	R	P	A	A	E	L	S	V	R	D	R	G	L	A	Y	G	D	G	L	F	E	T	L	A	V	R	A	G	T	P	R	L	L	E	R	H	L	A	R	L	E	E	G	C	R	R	L	A	I	P	L	D	T	A	A	L	R	Q	E	L	L	A	F	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T				S				T	T	B																	T	T			T	T																T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	A	L	G	D	G	V	A	K	L	I	V	T	R	G	E	G	L	R	G	Y	A	P	P	A	E	A	S	P	R	R	I	L	S	G	S	P	R	P	A	Y	P	E	R	H	W	Q	Q	G	V	R	L	F	A	C	R	T	R	L	A	E	Q	P	L	L	A	G	L	K	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S											B			S	S	S	S			T	T																																	B				T	T	T	T	B			B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	N	R	L	E	Q	V	L	A	R	A	E	W	S	D	A	G	H	A	E	G	L	M	L	D	V	H	E	R	V	V	E	G	V	F	S	N	L	L	L	V	L	D	G	T	L	V	A	P	D	L	R	R	C	G	V	A	G	V	M	R	A	E	L	L	E	R	A	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										T	T				T	T		S						B	T	T							S	S	S						S	S	S								S	S	S	S	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Sequence	I	G	V	P	L	A	I	R	D	V	S	M	A	E	L	A	T	A	D	E	V	F	L	C	N	S	Q	F	G	I	W	P	V	R	A	L	D	E	H	V	W	P	V	G	E	L	T	R	K	L	Q	D	Q	L	R	E	D	L	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T															T		S							T	T	T									T	T