PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2xcuC_

Fold library id	PDB Header	Molecule	Title
c2xcuC_	PDB header: transferase	Chain: C: PDB Molecule: 3-deoxy-d-manno-2-octulosonic acid transferase;	PDBTitle: membrane-embedded monofunctional glycosyltransferase waaa of aquifex2 aeolicus, comlex with cmp

Links to external resources
Added to library: Sat May 14 09:04:39 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H M Q F E V L K R F F P K E S L K N C K G A L W V H T A S I G E F N T F L P I L K E L K R E H R I L L T Y F S P R A R E Y L K T K S D F Y D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G G G G T T
S S T T T S
S
T T T T G G G
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence C L H P L P L D N P F S V K R F E E L S K P K A L I V V E R E F W P S L I I F T K V P K I L V N A Y A K G S L I E K I L S K K F D L I I M R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
S
G G G
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T Q E D V E K F K T F G A K R V F S C G N L K F I C Q K G K G I K L K G E F I V A G S I H T G E V E I I L K A F K E I K K T Y S S L K L I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T T
S S
G G G
S S
G G G T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence V P R H I E N A K I F E K K A R D F G F K T S F F E N L E G D V I L V D R F G I L K E L Y P V G K I A I V G G T F V N I G G H N L L E P T C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S G G G T T
T T
S S
T T
G G G
S S S S T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence W G I P V I Y G P Y T H K V N D L K E F L E K E G A G F E V K N E T E L V T K L T E L L S V K K E I K V E E K S R E I K G C Y L E K L R E F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T T S T T
S S

. . .

Sequence L R G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	M	Q	F	E	V	L	K	R	F	F	P	K	E	S	L	K	N	C	K	G	A	L	W	V	H	T	A	S	I	G	E	F	N	T	F	L	P	I	L	K	E	L	K	R	E	H	R	I	L	L	T	Y	F	S	P	R	A	R	E	Y	L	K	T	K	S	D	F	Y	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S			G	G	G	G	G	G	T	T							S	S															T	T	T	S							S		T	T							T	T	G	G	G		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	C	L	H	P	L	P	L	D	N	P	F	S	V	K	R	F	E	E	L	S	K	P	K	A	L	I	V	V	E	R	E	F	W	P	S	L	I	I	F	T	K	V	P	K	I	L	V	N	A	Y	A	K	G	S	L	I	E	K	I	L	S	K	K	F	D	L	I	I	M	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S														S						S													S																			G	G	G		S					S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	Q	E	D	V	E	K	F	K	T	F	G	A	K	R	V	F	S	C	G	N	L	K	F	I	C	Q	K	G	K	G	I	K	L	K	G	E	F	I	V	A	G	S	I	H	T	G	E	V	E	I	I	L	K	A	F	K	E	I	K	K	T	Y	S	S	L	K	L	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									T	T	T		S	S							G	G	G											S	S										G	G	G													T	T		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	P	R	H	I	E	N	A	K	I	F	E	K	K	A	R	D	F	G	F	K	T	S	F	F	E	N	L	E	G	D	V	I	L	V	D	R	F	G	I	L	K	E	L	Y	P	V	G	K	I	A	I	V	G	G	T	F	V	N	I	G	G	H	N	L	L	E	P	T	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	G	G	G											T	T						T	T				S	S							T	T						G	G	G								S	S	S	S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	W	G	I	P	V	I	Y	G	P	Y	T	H	K	V	N	D	L	K	E	F	L	E	K	E	G	A	G	F	E	V	K	N	E	T	E	L	V	T	K	L	T	E	L	L	S	V	K	K	E	I	K	V	E	E	K	S	R	E	I	K	G	C	Y	L	E	K	L	R	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T							S			T	T	S										T	T							S														S
	.	.	.
Sequence	L	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)