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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2wzkA_

Fold library idPDB HeaderMoleculeTitle
c2wzkA_PDB header: protein bindingChain: A: PDB Molecule: cullin-5;PDBTitle: structure of the cul5 n-terminal domain at 2.05a resolution.


Added to library: Sun Aug 29 08:06:54 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLQFEDKWDFMHPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGSSKIHQALKEDILEFIKQAQARVL
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Known secondary structure (DSSP)

ST




TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEVTLLGKMEDSIVRKLMLDTWNESIFSNIKNRLQDSA
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Known secondary structure (DSSP) T

STTTTTGGGTTSTT

TT
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence MKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQN
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Known secondary structure (DSSP) TT



TS


SS
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence YMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSL
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Known secondary structure (DSSP) S

TT

STGGGTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence MDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYREQLDTLFNRFSKLVKEAFQDDPRFLTAR
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Known secondary structure (DSSP) TTSTT
SGGGTTT
TT
 .........360.........
Sequence DKAYKAVVNDATIFKAENL
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Known secondary structure (DSSP)






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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