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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2wd6B_

Fold library idPDB HeaderMoleculeTitle
c2wd6B_PDB header: cell adhesionChain: B: PDB Molecule: agglutinin receptor;PDBTitle: crystal structure of the variable domain of the2 streptococcus gordonii surface protein sspb


Added to library: Sat Aug 28 16:30:28 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AYTAALAEAESKKKQDGYLSEPRSQSLNFKSEPNAIRTIDSSVHQYGQQELDALVKSWGISPTNPDRKKS
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Known secondary structure (DSSP)
TTTSTTBBSS


B




TT


TTS



TTT

TT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence RAYSYFNAINSNNTYAKLVLEKDKPVDVTYTGLKNSSFNGKKISKVVYTYTLKETGFNDGTKMTMFASSD
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Known secondary structure (DSSP) TT
TTSTT




S
TT


STTSS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PTVTAWYNDYFTSTNINVKVKFYDEEGQLMNLTGGLVNFSSLNRGNGSGAIDKDAIESVRNFNGRYIPIS
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Known secondary structure (DSSP) TTT

TTT
TTS
B


TT




BS
S
TTT
S

S
SS
BT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GSSIKIHENNSAYADSSNAEKSLGARWNTSEWDTTSSPNNWYGAIVGEITQSEISFNMASSKSGNIWFAF
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Known secondary structure (DSSP) T
STTTSS
SS
GGGT
SS
GGGT
SSS
TTGGGG


SSSS
S

 .........290...
Sequence NSNINAIGVPTKP
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Known secondary structure (DSSP) BS


SBS

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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