PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2wa1A_

Fold library id	PDB Header	Molecule	Title
c2wa1A_	PDB header: transferase	Chain: A: PDB Molecule: non-structural protein 5;	PDBTitle: structure of the methyltransferase domain from modoc virus,2 a flavivirus with no known vector (nkv)

Links to external resources
Added to library: Sat Aug 28 17:08:04 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G I C S S A P T L G E I W K R K L N Q L D A K E F M A Y R R R F V V S R G T A K L A W I D E R G G V E L K G T V V D L G C G R G S W S Y Y A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S T
T T
T T S
T
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A S Q P N V R E V K A Y T L G T S G H E K P R L V E T F G W N L I T F K S K V D V T K M E P F Q A D T V L C D I G E S N P T A A V E A S R T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T
S T T S
T T G G G
S
T T T
S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L T V L N V I S R W L E Y N Q G C G F C V K V L N P Y S C D V L E A L M K M Q A R F G G G L I R V P L S R N S T H E M Y F V S G I K N N I M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
S
S
T T S
T T
S S

. . . . . . . . . 220 . . . . . .

Sequence G N V T A V S R Q L L K R M E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	I	C	S	S	A	P	T	L	G	E	I	W	K	R	K	L	N	Q	L	D	A	K	E	F	M	A	Y	R	R	R	F	V	V	S	R	G	T	A	K	L	A	W	I	D	E	R	G	G	V	E	L	K	G	T	V	V	D	L	G	C	G	R	G	S	W	S	Y	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	S														T												T	T															T	T	S											T		T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	S	Q	P	N	V	R	E	V	K	A	Y	T	L	G	T	S	G	H	E	K	P	R	L	V	E	T	F	G	W	N	L	I	T	F	K	S	K	V	D	V	T	K	M	E	P	F	Q	A	D	T	V	L	C	D	I	G	E	S	N	P	T	A	A	V	E	A	S	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	S	T	T											S	T	T	S									T	T	G	G	G						S			T	T	T							S											S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	T	V	L	N	V	I	S	R	W	L	E	Y	N	Q	G	C	G	F	C	V	K	V	L	N	P	Y	S	C	D	V	L	E	A	L	M	K	M	Q	A	R	F	G	G	G	L	I	R	V	P	L	S	R	N	S	T	H	E	M	Y	F	V	S	G	I	K	N	N	I	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	T	T								S				S																						T	T	S		T	T								S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Sequence	G	N	V	T	A	V	S	R	Q	L	L	K	R	M	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)