Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2w6jD_

Fold library idPDB HeaderMoleculeTitle
c2w6jD_PDB header: hydrolaseChain: D: PDB Molecule: atp synthase subunit beta, mitochondrial;PDBTitle: low resolution structures of bovine mitochondrial f1-atpase2 during controlled dehydration: hydration state 5.


Added to library: Sat Aug 28 23:20:17 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TTGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDS
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)
TTSS



TT
SS
SS

TTSS

TT

TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence GAPIRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAK
Predicted secondary structure

















































SS confidence





































































Known secondary structure (DSSP) SSS

SGGGBT

TTS
B
SSS
S




S





GGG







S
S
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALV
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) T

TTSSTTTT
SSS

TSS
SSSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence YGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATD
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)
TTS
TT
S

TGGGT



GGG

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence MGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TTSS

SS


GGG
TTSGGG
SB
TTT
SS
B
TTS
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence DPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHL
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) S

GGGS
T



GGGSS
 .........430.........440.........450.........460.......
Sequence GKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAE
Predicted secondary structure















SS confidence














































Known secondary structure (DSSP)




TTTTTTS
GGGGTT
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D