PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2w53B_

Fold library id	PDB Header	Molecule	Title
c2w53B_	PDB header: transcription	Chain: B: PDB Molecule: repressor;	PDBTitle: structure of smet, the repressor of the stenotrophomonas2 maltophilia multidrug efflux pump smedef.

Links to external resources
Added to library: Sat Aug 28 17:23:57 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R E G I L D A A E M I G A R A G Y T S E V L A A I V E R V H L P F M Q E L E R T S T D Q R D T P V H D L R A V M I H S F I E L S E D E R L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K T M E I M L R S R V L T E M Q Q A G F R D A L D R M E R A L R R A R D L G Q L R E G A D P K I A A R M L H A T V L G V L H G A M V E P E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
B
T T
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . .

Sequence M D L K R D G M L A L D M T L A A Y V K D G V F V P G T V P E P L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T S S
T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	E	G	I	L	D	A	A	E	M	I	G	A	R	A	G	Y	T	S	E	V	L	A	A	I	V	E	R	V	H	L	P	F	M	Q	E	L	E	R	T	S	T	D	Q	R	D	T	P	V	H	D	L	R	A	V	M	I	H	S	F	I	E	L	S	E	D	E	R	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T																								T	T		T	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	T	M	E	I	M	L	R	S	R	V	L	T	E	M	Q	Q	A	G	F	R	D	A	L	D	R	M	E	R	A	L	R	R	A	R	D	L	G	Q	L	R	E	G	A	D	P	K	I	A	A	R	M	L	H	A	T	V	L	G	V	L	H	G	A	M	V	E	P	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T																														T	T		B		T	T																									T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Sequence	M	D	L	K	R	D	G	M	L	A	L	D	M	T	L	A	A	Y	V	K	D	G	V	F	V	P	G	T	V	P	E	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			B		T	T	S	S		T	T	S