Fold library entry viewer: c2w00B_

Added to library: Tue Mar 16 13:04:27 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	F	I	V	L	D	K	Y	I	K	A	E	P	T	G	D	S	Y	Q	S	E	S	D	L	E	R	E	L	I	Q	D	L	R	N	Q	G	Y	E	F	I	S	V	K	S	Q	S	A	X	L	A	N	V	R	E	Q	L	Q	N	L	N	G	V	V	F	N	D	S	E	W	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		S										S			S	S															T	T								S																	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	F	T	E	Q	Y	L	D	N	P	S	D	G	I	L	D	K	T	R	K	I	H	I	D	Y	I	C	D	F	I	F	D	D	E	R	L	E	N	I	Y	L	I	D	K	K	N	L	X	R	N	K	V	Q	I	I	Q	Q	F	E	N	R	Y	D	V	T	I	L	V	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T			T	T												T									T	T								S	S		S	S	S	G	G	G	S																			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	P	L	V	Q	I	E	L	K	K	R	G	V	A	I	R	E	A	F	N	Q	I	H	E	N	S	L	F	K	Y	L	Q	L	F	V	I	S	N	G	T	D	T	R	Y	F	A	N	T	T	K	R	D	K	N	S	F	D	F	T	X	N	W	A	K	S	D	N	T	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S													G	G	G	G	G									S	S									S		G	G	G		S	G	G	G		B					T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	D	L	K	D	F	T	A	T	C	F	Q	K	H	T	L	L	N	V	L	V	N	Y	S	V	F	D	S	S	Q	T	L	L	V	X	R	P	Y	Q	I	A	A	T	E	R	I	L	W	K	I	K	S	S	F	T	A	K	N	W	S	K	P	E	S	G	G	Y	I	W	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S								T	T	S										T	S					T	T																											T	T			S	S	G	G	G	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	T	G	S	G	K	T	L	T	S	F	K	A	A	R	L	A	T	E	L	D	F	I	D	K	V	F	F	V	V	D	R	K	D	L	D	Y	Q	T	X	K	E	Y	Q	R	F	S	P	D	S	V	N	G	S	E	N	T	A	G	L	K	R	N	L	D	K	D	D	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	S													T	T		T	T										G	G	G											T	T	S	T	T		S	S	S	S													S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	I	V	T	T	I	Q	K	L	N	N	L	X	K	A	E	S	D	L	P	V	Y	N	Q	Q	V	V	F	I	F	D	E	C	H	R	S	Q	F	G	E	A	Q	K	N	L	K	K	K	F	K	R	Y	Y	Q	F	G	F	T	G	T	P	I	F	P	E	N	A	L	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				G	G	G	G	S								S			T	T														S									S	S				S	T	T		T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	T	T	A	S	V	F	G	R	E	L	H	S	Y	V	I	T	D	A	I	R	D	E	K	V	L	K	F	K	V	D	Y	N	D	V	R	P	Q	F	K	S	L	E	T	E	T	D	E	K	K	L	S	A	A	E	N	Q	Q	A	F	L	H	P	X	R	I	Q	E	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S														T	S	S												T	T	T					T										T		S	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	Y	I	L	N	N	F	R	Q	K	T	H	R	T	F	P	G	S	K	G	F	N	A	X	L	A	V	S	S	V	D	A	A	K	A	Y	Y	A	T	F	K	R	L	Q	E	E	A	A	N	K	S	A	T	Y	K	P	L	R	I	A	T	I	F	S	F	A	A	I	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T			S	S	S											S	S																						S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	S	D	E	T	F	D	T	S	A	X	D	S	S	A	K	E	F	L	D	A	A	I	R	E	Y	N	S	H	F	K	T	N	F	S	T	D	S	N	G	F	Q	N	Y	Y	R	D	L	A	Q	R	V	K	N	Q	D	I	D	L	L	I	V	V	G	X	F	L	T	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S		G	G	G	S																				T					S	S																	T	T	S	S	S					S	S	T	T	S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	D	A	P	T	L	N	T	L	F	V	D	K	N	L	R	Y	H	G	L	X	Q	A	F	S	R	T	N	R	I	Y	D	A	T	K	T	F	G	N	I	V	T	F	R	D	L	E	R	S	T	I	D	A	I	T	L	F	G	D	K	N	T	K	N	V	V	L	E	K	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T								S												G	G	G						T	T			S						S	S													T	S		S	S						B
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	T	E	Y	X	E	G	F	T	D	A	A	T	G	E	A	K	R	G	F	X	T	V	V	S	E	L	E	Q	R	F	P	D	P	T	S	I	E	S	E	K	E	K	K	D	F	V	K	L	F	G	E	Y	L	R	A	E	N	I	L	Q	N	Y	D	E	F	A	T	L	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T																					S	S	S	S		S																						T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	L	Q	Q	I	D	L	S	D	P	V	A	V	E	K	F	K	A	E	H	Y	V	D	D	E	K	F	A	E	L	Q	T	I	R	L	P	A	D	R	K	I	Q	D	Y	R	S	A	Y	N	D	I	R	D	W	Q	R	R	E	K	E	T	T	D	W	D	D	V	V	F	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S			S	S			T	T								T	T									G	G	G																																	T	T
	.	.	.	.	.	.	.	.	.	850	.	.
Sequence	D	L	L	K	S	Q	E	I	N	L	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T				S

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PDB structure

FASTA sequence

Hidden Markov model

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