Fold library entry viewer: c2vwkA_

Added to library: Tue Mar 16 12:47:58 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	I	L	D	T	D	Y	I	T	E	D	G	K	P	V	I	R	I	F	K	K	E	N	G	E	F	K	I	D	Y	D	R	N	F	E	P	Y	I	Y	A	L	L	K	D	D	S	A	I	E	D	V	K	K	I	T	A	E	R	H	G	T	T	V	R	V	V	R	A	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T											T	T								S											S	S	G	G	G					T	T						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	K	K	K	F	L	G	R	P	I	E	V	W	K	L	Y	F	T	H	P	Q	D	Q	P	A	I	R	D	K	I	K	E	H	P	A	V	V	D	I	Y	E	Y	D	I	P	F	A	K	R	Y	L	I	D	K	G	L	I	P	M	E	G	D	E	E	L	K	M	L	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T											S		T	T											T	S	T	T						S		S	S											T			T	T		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	I	E	T	L	Y	H	E	G	E	K	F	A	E	G	P	I	L	M	I	S	Y	A	D	E	E	G	A	R	V	I	T	W	R	N	I	D	L	P	Y	V	D	V	V	S	T	E	K	E	M	I	K	R	F	L	K	V	V	K	E	K	D	P	D	V	L	I	T	Y	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S		T	T		S										S	S							S	S					T	T					S																			S					S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	D	N	F	A	F	A	Y	L	K	K	R	S	E	K	L	G	V	K	F	I	L	G	R	E	G	S	E	P	K	I	Q	R	M	G	D	R	F	A	V	E	V	K	G	R	I	H	F	D	L	Y	P	V	I	R	R	T	I	N	L	P	T	Y	T	L	E	A	V	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T													T						S	T	T	S									T	T							T	T	S													S			S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	I	F	G	Q	P	K	E	K	V	Y	A	E	E	I	A	Q	A	W	E	T	G	E	G	L	E	R	V	A	R	Y	S	M	E	D	A	K	V	T	Y	E	L	G	K	E	F	F	P	M	E	A	Q	L	S	R	L	V	G	Q	S	L	W	D	V	S	R	S	S	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T		S																T		T	T																																		T	S						T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	L	V	E	W	F	L	L	R	K	A	Y	E	R	N	E	L	A	P	N	K	P	D	E	R	E	L	A	R	R	R	E	S	Y	A	G	G	Y	V	K	E	P	E	R	G	L	W	E	N	I	V	Y	L	D	F	R	S	L	Y	P	S	I	I	I	T	H	N	V	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	B																S								B					S											T	T									T	T			T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	T	L	N	R	E	G	C	E	E	Y	D	V	A	P	Q	V	G	H	K	F	C	K	D	F	P	G	F	I	P	S	L	L	G	D	L	L	E	E	R	Q	K	V	K	K	K	M	K	A	T	I	D	P	I	E	K	K	L	L	D	Y	R	Q	R	A	I	K	I	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	B	T		T	T		S	S					T	T	T							S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	S	F	Y	G	Y	Y	G	Y	A	K	A	R	W	Y	C	K	E	C	A	E	S	V	T	A	W	G	R	Q	Y	I	E	T	T	I	R	E	I	E	E	K	F	G	F	K	V	L	Y	A	D	T	D	G	F	F	A	T	I	P	G	A	D	A	E	T	V	K	K	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						T		T	T		T	T																											T	T									T	T							T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	E	F	L	D	Y	I	N	A	K	L	P	G	L	L	E	L	E	Y	E	G	F	Y	K	R	G	F	F	V	T	K	K	K	Y	A	V	I	D	E	E	D	K	I	T	T	R	G	L	E	I	V	R	R	D	W	S	E	I	A	K	E	T	Q	A	R	V	L	E	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S		T	T																	T	T							T	T	S						S		S				S	S	B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	K	H	G	D	V	E	E	A	V	R	I	V	K	E	V	T	E	K	L	S	K	Y	E	V	P	P	E	K	L	V	I	Y	E	Q	I	T	R	D	L	K	D	Y	K	A	T	G	P	H	V	A	V	A	K	R	L	A	A	R	G	I	K	I	R	P	G	T	V	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	S																			T	T		S		G	G	G	G							S	S		G	G	G	S		S	S	S	T										T	T	T					T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	Y	I	V	L	K	G	S	G	R	I	G	D	R	A	I	P	F	D	E	F	D	P	A	K	H	K	Y	D	A	E	Y	Y	I	E	N	Q	V	L	P	A	V	E	R	I	L	R	A	F	G	Y	R	K	E	D	L	R	Y	Q	K	T	R	Q	V	G	L	G	A	W	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B			S	S	S	T	T						G	G	G			T	T	T			B								T	T											T	T	T			G	G	G	G	S		S	S	S				S						S
	.	.	.
Sequence	P	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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