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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2vr3B_

Fold library idPDB HeaderMoleculeTitle
c2vr3B_PDB header: cell adhesionChain: B: PDB Molecule: clumping factor a;PDBTitle: structural and biochemical characterization of fibrinogen2 binding to clfa from staphylocccus aureus


Added to library: Sat Aug 28 15:51:15 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TDITNQLTNVTVGIDSGTTVYPHQAGYVKLNYGFSVPNSAVKGDTFKITVPKELNLNGVTSTAKVPPIMA
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Known secondary structure (DSSP)
B
GGG


S
GGGT


TT

TT


TTS
TTBS





 .........80.........90.........100.........110.........120.........130.........140
Sequence GDQVLANGVIDSDGNVIYTFTDYVNTKCDVKATLTMPAYIDPENVKKTGNVTLATGIGSTTANKTVLVDY
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Known secondary structure (DSSP) TT
TTS

GGGGS
TTT

SSTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVN
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Known secondary structure (DSSP)


TTTTTTSTT



TTS



STTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence AADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGY
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Known secondary structure (DSSP) GGGS
SS



GGGS
GGGSTT


S
S

TT
SS

 .........290.........300.........310
Sequence NSNIIWRSMSWDNEVAFNNGSGSGDGIDCP
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Known secondary structure (DSSP)
TT










Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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