Fold library entry viewer: c2vpqA_

Added to library: Tue Mar 16 13:08:49 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	K	V	L	I	A	N	R	G	E	I	A	V	R	I	I	R	A	C	R	D	L	G	I	Q	T	V	A	I	Y	S	E	G	D	K	D	A	L	H	T	Q	I	A	D	E	A	Y	C	V	G	P	T	L	S	K	D	S	Y	L	N	I	P	N	I	L	S	I	A	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T									G	G	G	T	T							S	S								S	S	G	G	G	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	G	C	D	G	V	H	P	G	Y	G	F	L	A	E	N	A	D	F	A	E	L	C	E	A	C	Q	L	K	F	I	G	P	S	Y	Q	S	I	Q	K	M	G	I	K	D	V	A	K	A	E	M	I	K	A	N	V	P	V	V	P	G	S	D	G	L	M	K	D	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S						S	S	T	T	T	T										T	T	T				S	S	S										S											T	T			B		S	B		S	S		B	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	A	K	K	I	A	K	K	I	G	Y	P	V	I	I	K	A	T	A	G	G	G	G	K	G	I	R	V	A	R	D	E	K	E	L	E	T	G	F	R	M	T	E	Q	E	A	Q	T	A	F	G	N	G	G	L	Y	M	E	K	F	I	E	N	F	R	H	I	E	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S						T	T			T	T		S					S	S																				S												S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	V	G	D	S	Y	G	N	V	I	H	L	G	E	R	D	C	T	I	Q	R	R	M	Q	K	L	V	E	E	A	P	S	P	I	L	D	D	E	T	R	R	E	M	G	N	A	A	V	R	A	A	K	A	V	N	Y	E	N	A	G	T	I	E	F	I	Y	D	L	N	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S															T	T								S		T	T																				T	T													T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	K	F	Y	F	M	E	M	N	T	R	I	Q	V	E	H	P	V	T	E	M	V	T	G	I	D	L	V	K	L	Q	L	Q	V	A	M	G	D	V	L	P	Y	K	Q	E	D	I	K	L	T	G	H	A	I	E	F	R	I	N	A	E	N	P	Y	K	N	F	M	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T										S			T	T																					T	T				S			G	G	G					S									S			G	G	G	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	G	K	I	E	Q	Y	L	A	P	G	G	Y	G	V	R	I	E	S	A	C	Y	T	N	Y	T	I	P	P	Y	Y	D	S	M	V	A	K	L	I	I	H	E	P	T	R	D	E	A	I	M	A	G	I	R	A	L	S	E	F	V	V	L	G	I	D	T	T	I	P	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	B		S							S	T	T									T	T		B			T	T	T												S	S														T					S	S			S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Sequence	H	I	K	L	L	N	N	D	I	F	R	S	G	K	F	N	T	N	F	L	E	Q	N	S	I	M	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T							T				T	T	T	T	T	T	S		T	T

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PDB structure

FASTA sequence

Hidden Markov model

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