PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2vmlA_

Fold library id	PDB Header	Molecule	Title
c2vmlA_	PDB header: photosynthesis	Chain: A: PDB Molecule: phycocyanin alpha chain;	PDBTitle: the monoclinic structure of phycocyanin from gloeobacter2 violaceus

Links to external resources
Added to library: Tue Mar 16 12:23:42 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K T V I T E V I A S A D S Q G R F L N N T E L Q A A N G R F Q R A T A S M E A A R A L T S N A D S L V K G A V Q E V Y N K F P Y L T Q P G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T S G G G G S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q M G Y G D T N Q A K C A R D I S H Y L R F I T Y S L V A G G T G P L D D Y I V A G L R E V N R T F N L S P S W Y I E A L K H I K G K V G S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
S T S S T T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . .

Sequence Q L S G Q P L T E A N A Y I D Y C I N A L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	T	V	I	T	E	V	I	A	S	A	D	S	Q	G	R	F	L	N	N	T	E	L	Q	A	A	N	G	R	F	Q	R	A	T	A	S	M	E	A	A	R	A	L	T	S	N	A	D	S	L	V	K	G	A	V	Q	E	V	Y	N	K	F	P	Y	L	T	Q	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T																															T																S	G	G	G	G	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	M	G	Y	G	D	T	N	Q	A	K	C	A	R	D	I	S	H	Y	L	R	F	I	T	Y	S	L	V	A	G	G	T	G	P	L	D	D	Y	I	V	A	G	L	R	E	V	N	R	T	F	N	L	S	P	S	W	Y	I	E	A	L	K	H	I	K	G	K	V	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T		S																									T	S	S							T	T	T	T								T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Sequence	Q	L	S	G	Q	P	L	T	E	A	N	A	Y	I	D	Y	C	I	N	A	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T