Fold library entry viewer: c2vlcB_

Added to library: Tue Mar 16 14:35:15 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	Q	T	V	T	F	T	T	K	N	A	T	K	T	S	Y	T	Q	F	I	E	A	L	R	A	Q	L	A	S	G	E	E	P	H	G	I	P	V	M	R	E	R	S	T	V	P	D	S	K	R	F	I	L	V	E	L	S	N	W	A	A	D	S	P	V	T	L	A	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T																				S			G	G	G	S		B				G	G	G	S		G	G	G										S	S		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	T	N	A	Y	V	V	A	Y	R	T	G	S	Q	S	F	F	L	R	E	D	N	P	D	P	A	I	E	N	L	L	P	D	T	K	R	Y	T	F	P	F	S	G	S	Y	T	D	L	E	R	V	A	G	E	R	R	E	E	I	L	L	G	M	D	P	L	E	N	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T									T	T								S	S			T	T	T	T	T	S	S		S	S						S	S		S	S									T	S		G	G	G	S		B	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	A	L	W	I	S	N	L	N	Q	Q	R	A	L	A	R	S	L	I	V	V	I	Q	M	V	A	E	A	V	R	F	R	F	I	E	Y	R	V	R	E	S	I	S	R	A	E	M	F	R	P	D	P	A	M	L	S	L	E	N	K	W	S	A	L	S	N	A	V	Q	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T															T						B														T			B																						T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	N	Q	G	G	V	F	S	S	P	V	E	L	R	S	I	S	N	K	P	V	Y	V	G	S	V	S	D	R	V	I	S	G	L	A	I	M	L	F	I	C	R	S	T	N	D	D	T	C	A	D	P	E	P	T	V	R	I	S	G	R	N	G	L	C	V	R	V	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T												S	S	S								T	T	S	G	G	G	G	G	B			B											S													G	G	G						G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	K	Y	N	N	G	N	P	I	Q	L	W	P	C	K	Q	N	S	D	V	N	Q	L	W	T	L	R	R	D	G	T	I	R	S	N	G	K	C	L	T	T	N	G	Y	S	A	G	D	Y	V	M	I	Y	D	C	R	T	P	V	T	A	A	S	I	W	Q	F	W	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G			S	T	T		B									S			G	G	G						T	T	S	B				T	T						S		S	S	T	T		B								S	S			G	G	G	B					T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	T	I	I	N	P	Q	S	A	L	V	L	S	A	E	S	G	N	P	R	T	T	L	T	V	Q	A	D	I	Y	A	S	R	Q	G	W	L	A	G	N	N	T	E	P	F	V	T	S	I	V	G	F	N	D	L	C	M	Q	A	N	G	D	A	M	W	V	V	E	C	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					G	G	G	T						S	S		S	T	T		B										G	G	G						S			S									G	G	G							T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	S	K	A	E	Q	K	W	A	L	Y	P	D	G	S	I	R	P	H	Q	D	R	D	R	C	L	T	S	T	D	N	H	S	Q	G	S	I	I	I	I	S	S	C	S	P	G	S	E	G	Q	R	W	V	F	M	N	D	G	T	I	L	N	L	K	N	G	L	V	M	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S	T	T						T	T	S					T	T		T	T						S		T	T	S	T	T		B						S	T	T			G	G	G						T	T	S					T	T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Sequence	V	K	G	S	D	P	S	L	H	Q	I	I	I	W	P	A	T	G	K	P	N	Q	K	W	L	P	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G		G	G	G										S	S	G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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