PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2vkxE_

Fold library id	PDB Header	Molecule	Title
c2vkxE_	PDB header: cell adhesion	Chain: E: PDB Molecule: neural cell adhesion molecule;	PDBTitle: human ncam, fn3 domains 1 and 2, m610r mutant

Links to external resources
Added to library: Tue Mar 16 12:24:30 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A P L A Q A D T P S S P S I D Q V E P Y S S T A Q V Q F D E P E A T G G V P I L K Y K A E W R A V G E E V W H S K W Y D A K E A S M E G I V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
S
S S
T T
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T I V G L K P E T T Y A V R L A A L N G K G L G E I S A A S E F K T Q P V R E P S A P K L E G Q R G E D G N S I K V N L I K Q D D G G S P I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S S T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . .

Sequence R H Y L V R Y R A L S S E W K P E I R L P S G S D H V M L K S L D W N A E Y E V Y V V A E N Q Q G K S K A A H F V F R T A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T
S
T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	P	L	A	Q	A	D	T	P	S	S	P	S	I	D	Q	V	E	P	Y	S	S	T	A	Q	V	Q	F	D	E	P	E	A	T	G	G	V	P	I	L	K	Y	K	A	E	W	R	A	V	G	E	E	V	W	H	S	K	W	Y	D	A	K	E	A	S	M	E	G	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S													S	S										S				S	S												T	T		S	S															S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	I	V	G	L	K	P	E	T	T	Y	A	V	R	L	A	A	L	N	G	K	G	L	G	E	I	S	A	A	S	E	F	K	T	Q	P	V	R	E	P	S	A	P	K	L	E	G	Q	R	G	E	D	G	N	S	I	K	V	N	L	I	K	Q	D	D	G	G	S	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T												T	T																														S	S	T	T													S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Sequence	R	H	Y	L	V	R	Y	R	A	L	S	S	E	W	K	P	E	I	R	L	P	S	G	S	D	H	V	M	L	K	S	L	D	W	N	A	E	Y	E	V	Y	V	V	A	E	N	Q	Q	G	K	S	K	A	A	H	F	V	F	R	T	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S	S										T	T								S			T	T												T	T