PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2vdcF_

Fold library id	PDB Header	Molecule	Title
c2vdcF_	PDB header: oxidoreductase	Chain: F: PDB Molecule: glutamate synthase [nadph] large chain;	PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications.

Links to external resources
Added to library: Tue Mar 16 14:08:28 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence C G V G F I A A I D G K P R R S V V E K G I E A L K A V W H R G A V D A D G K T G D G A G I H V A V P Q K F F K D H V K V I G H R A P D N K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
B T S
G G G S
T T S
T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L A V G Q V F L P R I S L D A Q E A C R C I V E T E I L A F G Y Y I Y G W R Q V P I N V D I I G E K A N A T R P E I E Q I I V G N N K G V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
G G G S
T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D E Q F E L D L Y I I R R R I E K A V K G E Q I N D F Y I C S L S A R S I I Y K G M F L A E Q L T T F Y P D L L D E R F E S D F A I Y H Q R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S S
G G G
G G G G
T T
B S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence Y S T N T F P T W P L A Q P F R M L A H N G E I N T V K G N V N W M K A H E T R M E H P A F G T H M Q D L K P V I G V G L S D S G S L D T V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
G G G S S
S S
T T T T
S T T G G G
S S S
T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence F E V M V R A G R T A P M V K M M L V P Q A L T S S Q T T P D N H K A L I Q Y C N S V M E P W D G P A A L A M T D G R W V V G G M D R N G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S T T S
S
S S S S S
T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence R P M R Y T I T T D G L I I G G S E T G M V K I D E T Q V I E K G R L G P G E M I A V D L Q S G K L Y R D R E L K D H L A T L K P W D K W V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S S S S
S S
G G G
T T
T T T T
T S S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence Q N T T H L D E L V K T A S L K G E P S D M D K A E L R R R Q Q A F G L T M E D M E L I L H P M V E D G K E A I G S M G D D S P I A V L S D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
B
T T T T
T T
T T S S
S
S
G G G
S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence K Y R G L H H F F R Q N F S Q V T N P P I D S L R E R R V M S L K T R L G N L G N I L D E D E T Q T R L L Q L E S P V L T T A E F R A M R D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G T B
S S S
T T T T G G G
S
S
T T
S G G G S
S S
S B

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence Y M G D T A A E I D A T F P V D G G P E A L R D A L R R I R Q E T E D A V R G G A T H V I L T D E A M G P A R A A I P A I L A T G A V H T H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T
T T T
T T
S S S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence L I R S N L R T F T S L N V R T A E G L D T H Y F A V L I G V G A T T V N A Y L A Q E A I A E R H R R G L F G S M P L E K G M A N Y K K A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T
S S
S T T T
S
T T T T S S
S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence D D G L L K I M S K M G I S V I S S Y R G G G N F E A I G L S R A L V A E H F P A M V S R I S G I G L N G I Q K K V L E Q H A T A Y N E E V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T S
B S S B
S S S
S S
B
S S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence V A L P V G G F Y R F R K S G D R H G W E G G V I H T L Q Q A V T N D S Y T T F K K Y S E Q V N K R P P M Q L R D L L E L R S T K A P V P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S S
S S S S
S S
T T
T S
S G G G G B
S S
G

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence D E V E S I T A I R K R F I T P G M S M G A L S P E A H G T L N V A M N R I G A K S D S G E G G E D P A R F R P D K N G D N W N S A I K Q V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G S
T T
B T T B
T T
S S
G G G G S
T T S
S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence A S G R F G V T A E Y L N Q C R E L E I K V A Q G A K P G E G G Q L P G F K V T E M I A R L R H S T P G V M L I S P P P H H D I Y S I E D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
T S
S
T T
T T T
G G G
T
T T
S S
T T
S S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence A Q L I Y D L K Q I N P D A K V T V K L V S R S G I G T I A A G V A K A N A D I I L I S G N S G G T G A S P Q T S I K F A G L P W E M G L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T T
S
T T
S S S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence E V H Q V L T L N R L R H R V R L R T D G G L K T G R D I V I A A M L G A E E F G I G T A S L I A M G C I M V R Q C H S N T C P V G V C V Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T S S S
S T T
S
T T
G G G T
T T S S S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence D D K L R Q K F V G T P E K V V N L F T F L A E E V R E I L A G L G F R S L N E V I G R T D L L H Q V S R G A E H L D D L D L N P R L A Q V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T
S S S G G G T T
G G G
B
S S S S
S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence D P G E N A R Y C T L Q G R N E V P D T L D A R I V A D A R P L F E E G E K M Q L A Y N A R N T Q R A I G T R L S S M V T R K F G M F G L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
S
T T
T T
S T T T T T S S

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence P G H I T I R L R G T A G Q S L G A F A V Q G I K L E V M G D A N D Y V G K G L S G G T I V V R P T T S S P L E T N K N T I I G N T V L Y G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S T T T T
B T T
S
T T T T
T T
G G G S B
S
S S T T T T

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence A T A G K L F A A G Q A G E R F A V R N S G A T V V V E G C G S N G C E Y M T G G T A V I L G R V G D N F A A G M T G G M A Y V Y D L D D S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S B B
S S T T T T
S
B
S S T T T T
S
B
S S B T T T
S S
T T S

. . . . . . . . . 1410 . . . . . . . . . 1420 . . . . . . . . . 1430 . . . . . . . . . 1440 . . . . . . . . . 1450 . . . . . . . . . 1460 . . . . . . . . . 1470

Sequence L P L Y I N D E S V I F Q R I E V G H Y E S Q L K H L I E E H V T E T Q S R F A A E I L N D W A R E V T K F W Q V V P K E M L N R L E V P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
G G G
S T T
T T T
G G G T T T
S S
S

. .

Sequence H L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	C	G	V	G	F	I	A	A	I	D	G	K	P	R	R	S	V	V	E	K	G	I	E	A	L	K	A	V	W	H	R	G	A	V	D	A	D	G	K	T	G	D	G	A	G	I	H	V	A	V	P	Q	K	F	F	K	D	H	V	K	V	I	G	H	R	A	P	D	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T				B												T	S		G	G	G	S				T	T	S																									T					S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	A	V	G	Q	V	F	L	P	R	I	S	L	D	A	Q	E	A	C	R	C	I	V	E	T	E	I	L	A	F	G	Y	Y	I	Y	G	W	R	Q	V	P	I	N	V	D	I	I	G	E	K	A	N	A	T	R	P	E	I	E	Q	I	I	V	G	N	N	K	G	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S																			T	T													G	G	G	S							T												T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	E	Q	F	E	L	D	L	Y	I	I	R	R	R	I	E	K	A	V	K	G	E	Q	I	N	D	F	Y	I	C	S	L	S	A	R	S	I	I	Y	K	G	M	F	L	A	E	Q	L	T	T	F	Y	P	D	L	L	D	E	R	F	E	S	D	F	A	I	Y	H	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T			S								S	S										G	G	G						G	G	G	G		T	T			B	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Y	S	T	N	T	F	P	T	W	P	L	A	Q	P	F	R	M	L	A	H	N	G	E	I	N	T	V	K	G	N	V	N	W	M	K	A	H	E	T	R	M	E	H	P	A	F	G	T	H	M	Q	D	L	K	P	V	I	G	V	G	L	S	D	S	G	S	L	D	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S				G	G	G	S	S			S	S								T	T													T	T				S	T	T	G	G	G						S	S	S		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	E	V	M	V	R	A	G	R	T	A	P	M	V	K	M	M	L	V	P	Q	A	L	T	S	S	Q	T	T	P	D	N	H	K	A	L	I	Q	Y	C	N	S	V	M	E	P	W	D	G	P	A	A	L	A	M	T	D	G	R	W	V	V	G	G	M	D	R	N	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T											S							S	T	T	S															S					S	S							S	S	S								T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	P	M	R	Y	T	I	T	T	D	G	L	I	I	G	G	S	E	T	G	M	V	K	I	D	E	T	Q	V	I	E	K	G	R	L	G	P	G	E	M	I	A	V	D	L	Q	S	G	K	L	Y	R	D	R	E	L	K	D	H	L	A	T	L	K	P	W	D	K	W	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S								T	T	S						S	S	S		S	S				G	G	G									T	T							T	T	T	T														T	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Q	N	T	T	H	L	D	E	L	V	K	T	A	S	L	K	G	E	P	S	D	M	D	K	A	E	L	R	R	R	Q	Q	A	F	G	L	T	M	E	D	M	E	L	I	L	H	P	M	V	E	D	G	K	E	A	I	G	S	M	G	D	D	S	P	I	A	V	L	S	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		B		T	T									T	T																	T	T								T	T								S	S						S				S			G	G	G		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	Y	R	G	L	H	H	F	F	R	Q	N	F	S	Q	V	T	N	P	P	I	D	S	L	R	E	R	R	V	M	S	L	K	T	R	L	G	N	L	G	N	I	L	D	E	D	E	T	Q	T	R	L	L	Q	L	E	S	P	V	L	T	T	A	E	F	R	A	M	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				G	G	G	T	B							S	S	S					T	T	T	T	G	G	G								S			S		T	T			S	G	G	G	S		S				S		S	B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Y	M	G	D	T	A	A	E	I	D	A	T	F	P	V	D	G	G	P	E	A	L	R	D	A	L	R	R	I	R	Q	E	T	E	D	A	V	R	G	G	A	T	H	V	I	L	T	D	E	A	M	G	P	A	R	A	A	I	P	A	I	L	A	T	G	A	V	H	T	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T										S	T	T		T	T																				T									T	T		S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	I	R	S	N	L	R	T	F	T	S	L	N	V	R	T	A	E	G	L	D	T	H	Y	F	A	V	L	I	G	V	G	A	T	T	V	N	A	Y	L	A	Q	E	A	I	A	E	R	H	R	R	G	L	F	G	S	M	P	L	E	K	G	M	A	N	Y	K	K	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		T	T	T								S	S			S									T	T	T		S						T	T										T	T	S	S		S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	D	D	G	L	L	K	I	M	S	K	M	G	I	S	V	I	S	S	Y	R	G	G	G	N	F	E	A	I	G	L	S	R	A	L	V	A	E	H	F	P	A	M	V	S	R	I	S	G	I	G	L	N	G	I	Q	K	K	V	L	E	Q	H	A	T	A	Y	N	E	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T								T	T	S					B	S	S	B									S	S	S				S	S			B																		S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	V	A	L	P	V	G	G	F	Y	R	F	R	K	S	G	D	R	H	G	W	E	G	G	V	I	H	T	L	Q	Q	A	V	T	N	D	S	Y	T	T	F	K	K	Y	S	E	Q	V	N	K	R	P	P	M	Q	L	R	D	L	L	E	L	R	S	T	K	A	P	V	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S						S	S	S			S	S	S	S			S	S														T	T														T	S				S	G	G	G	G	B					S	S					G
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	D	E	V	E	S	I	T	A	I	R	K	R	F	I	T	P	G	M	S	M	G	A	L	S	P	E	A	H	G	T	L	N	V	A	M	N	R	I	G	A	K	S	D	S	G	E	G	G	E	D	P	A	R	F	R	P	D	K	N	G	D	N	W	N	S	A	I	K	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S								T	T								B	T	T	B															T	T							S	S				G	G	G	G	S			T	T	S						S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	A	S	G	R	F	G	V	T	A	E	Y	L	N	Q	C	R	E	L	E	I	K	V	A	Q	G	A	K	P	G	E	G	G	Q	L	P	G	F	K	V	T	E	M	I	A	R	L	R	H	S	T	P	G	V	M	L	I	S	P	P	P	H	H	D	I	Y	S	I	E	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		T	T							T	S		S									T	T		T	T	T						G	G	G										T			T	T							S	S		T	T		S	S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	A	Q	L	I	Y	D	L	K	Q	I	N	P	D	A	K	V	T	V	K	L	V	S	R	S	G	I	G	T	I	A	A	G	V	A	K	A	N	A	D	I	I	L	I	S	G	N	S	G	G	T	G	A	S	P	Q	T	S	I	K	F	A	G	L	P	W	E	M	G	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T											T	T											T	T		S							T	T				S	S									S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	E	V	H	Q	V	L	T	L	N	R	L	R	H	R	V	R	L	R	T	D	G	G	L	K	T	G	R	D	I	V	I	A	A	M	L	G	A	E	E	F	G	I	G	T	A	S	L	I	A	M	G	C	I	M	V	R	Q	C	H	S	N	T	C	P	V	G	V	C	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T		T	T	T	S						S	S			S										T	T		S												T	T							G	G	G	T			T	T	S	S	S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	D	D	K	L	R	Q	K	F	V	G	T	P	E	K	V	V	N	L	F	T	F	L	A	E	E	V	R	E	I	L	A	G	L	G	F	R	S	L	N	E	V	I	G	R	T	D	L	L	H	Q	V	S	R	G	A	E	H	L	D	D	L	D	L	N	P	R	L	A	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T																											T		S	S	S	G	G	G	T	T		G	G	G			B					S	S	S	S												S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	D	P	G	E	N	A	R	Y	C	T	L	Q	G	R	N	E	V	P	D	T	L	D	A	R	I	V	A	D	A	R	P	L	F	E	E	G	E	K	M	Q	L	A	Y	N	A	R	N	T	Q	R	A	I	G	T	R	L	S	S	M	V	T	R	K	F	G	M	F	G	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S										S								T								T																		T	T			S	T	T												T	T	T	S	S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	P	G	H	I	T	I	R	L	R	G	T	A	G	Q	S	L	G	A	F	A	V	Q	G	I	K	L	E	V	M	G	D	A	N	D	Y	V	G	K	G	L	S	G	G	T	I	V	V	R	P	T	T	S	S	P	L	E	T	N	K	N	T	I	I	G	N	T	V	L	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S											S	S	T	T	T	T		B	T	T											S		T	T	T	T												T	T					G	G	G	S	B		S		S	S	T	T	T	T
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	A	T	A	G	K	L	F	A	A	G	Q	A	G	E	R	F	A	V	R	N	S	G	A	T	V	V	V	E	G	C	G	S	N	G	C	E	Y	M	T	G	G	T	A	V	I	L	G	R	V	G	D	N	F	A	A	G	M	T	G	G	M	A	Y	V	Y	D	L	D	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	B	B		S	S	T	T	T	T									S		B		S	S	T	T	T	T										S		B		S	S	B	T	T	T			S	S							T	T	S
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
Sequence	L	P	L	Y	I	N	D	E	S	V	I	F	Q	R	I	E	V	G	H	Y	E	S	Q	L	K	H	L	I	E	E	H	V	T	E	T	Q	S	R	F	A	A	E	I	L	N	D	W	A	R	E	V	T	K	F	W	Q	V	V	P	K	E	M	L	N	R	L	E	V	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B		G	G	G								S	T	T																											T						T	T							G	G	G	T	T	T		S	S		S
	.	.
Sequence	H	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)