Fold library entry viewer: c2vakF_

Added to library: Tue Mar 16 12:38:26 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	M	A	R	A	I	Y	D	F	F	S	T	P	F	G	N	R	G	L	A	T	N	R	T	Q	L	S	S	L	L	S	S	S	N	S	P	W	Q	I	V	S	T	P	E	A	P	Y	P	G	S	L	M	Y	Q	E	S	M	L	H	S	A	T	V	P	G	V	L	G	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B													T	T	S	S	S								T	T	S		T	T			S							S	S	S		S																S	G	G	G	T	T		T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	A	W	R	T	F	N	V	F	G	L	S	W	T	D	E	G	L	S	G	L	V	A	A	Q	D	P	P	P	A	A	P	Y	Q	P	A	S	A	Q	W	S	D	L	L	N	Y	P	R	W	A	N	R	R	R	E	L	Q	S	K	Y	P	L	L	L	R	S	T	L	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							B	T	T				S	S	T	T									S	S		S	S							T	T					G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	M	R	A	G	P	V	L	Y	V	E	T	W	P	N	M	I	S	G	R	L	A	D	W	F	M	S	Q	Y	G	N	N	F	V	D	M	C	A	R	L	T	Q	S	C	S	N	M	P	V	E	P	D	G	N	Y	D	Q	Q	M	R	A	L	I	S	L	W	L	L	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S	S									T	T		S											T	T	T		B												T	S	S					T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	G	V	V	N	Q	T	N	T	I	S	G	F	Y	F	S	S	K	T	R	G	Q	A	L	D	S	W	T	L	F	Y	T	T	N	T	N	R	V	Q	I	T	Q	R	H	F	A	Y	V	C	A	R	S	P	D	W	N	V	D	K	S	W	I	A	A	A	N	L	T	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S	B	T	T	B	B	B	T	T						S	S	S	S	S	T	T									S	S	S		B					S										S	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	M	A	C	R	Q	P	P	V	F	A	N	Q	G	V	I	N	Q	A	Q	N	R	P	G	F	S	M	N	G	G	T	P	V	H	E	L	N	L	L	T	T	A	Q	E	C	I	R	Q	W	V	M	A	G	L	V	S	A	A	K	G	Q	A	L	T	Q	E	A	N	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	B							G	G	G	S		G	G	G	T	T		T	T	T			T	T		B																					T	T	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Sequence	S	N	L	I	Q	A	D	L	G	Q	I	K	A	Q	D	D	A	L	Y	N	Q	Q	P	G	Y	A	R	R	I	K	P	F	V	N	G	D	W	T	P	G	M	T	A	Q	A	L	A	V	L	A	T	F	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						S	T	T				S	S					G	G	G	G	S		T	T										G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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