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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2v70D_ | PDB header: structural protein | Chain: D: PDB Molecule: slit homolog 2 protein n-product; | PDBTitle: third lrr domain of human slit2 |
Added to library: Tue Mar 16 14:05:39 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | A | C | P | E | K | C | R | C | E | G | T | T | V | D | C | S | N | Q | K | L | N | K | I | P | E | H | I | P | Q | Y | T | A | E | L | R | L | N | N | N | E | F | T | V | L | E | A | T | G | I | F | K | K | L | P | Q | L | R | K | I | N | F | S | N | N | K | I | T | D | I | E |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | S | S | S | S | S | T | T | S | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | G | G | G | G | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | E | G | A | F | E | G | A | S | G | V | N | E | I | L | L | T | S | N | R | L | E | N | V | Q | H | K | M | F | K | G | L | E | S | L | K | T | L | M | L | R | S | N | R | I | T | C | V | G | N | D | S | F | I | G | L | S | S | V | R | L | L | S | L | Y | D | N | Q | I | T | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S | G | G | G | G | T | T | S | S | ![]() | ![]() | ![]() | T | T | S | B | T | T | S | S | T | T | T | T | S | ![]() | ![]() | ![]() | T | T |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | V | A | P | G | A | F | D | T | L | H | S | L | S | T | L | N | L | L | A | N | P | F | N | C | N | C | Y | L | A | W | L | G | E | W | L | R | K | K | R | I | V | T | G | N | P | R | C | Q | K | P | Y | F | L | K | E | I | P | I | Q | D | V | A | I | Q | D | F | T | C | D | D |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | S | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | B | ![]() | ![]() | ![]() | ![]() | S | G | G | G | T | T | ![]() | ![]() | G | G | G | S | G | G | G |
Download: | PDB structure | FASTA sequence |
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