Fold library entry viewer: c2v5dA_

Added to library: Tue Mar 16 12:55:34 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	L	V	P	N	L	N	P	T	P	E	N	L	E	V	V	G	D	G	F	K	I	T	S	S	I	N	L	V	G	E	E	E	A	D	E	N	A	V	N	A	L	R	E	F	L	T	A	N	N	I	E	I	N	S	E	N	D	P	N	S	T	T	L	I	I	G	E	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S			S						S							S							S	S	S	S															T	T					S	S			S	S	S								S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	D	I	P	E	L	D	E	A	L	N	G	T	T	A	E	N	L	K	E	E	G	Y	A	L	V	S	N	D	G	K	I	A	I	E	G	K	D	G	D	G	T	F	Y	G	V	Q	T	F	K	Q	L	V	K	E	S	N	I	P	E	V	N	I	T	D	Y	P	T	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										S	S			S	T	T	S		T	T								S	S							S	S																S	S	S												S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	R	G	I	V	E	G	F	Y	G	T	P	W	T	H	Q	D	R	L	D	Q	I	K	F	Y	G	E	N	K	L	N	T	Y	I	Y	A	P	K	D	D	P	Y	H	R	E	K	W	E	S	E	M	Q	R	M	Q	E	L	I	N	A	S	A	E	N	K	V	D	F	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S																	T	T									S			S	T	T	T	T	T			T	T														T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	I	S	P	G	I	D	I	R	F	D	G	D	A	G	E	E	D	F	N	H	L	I	T	K	A	E	S	L	Y	D	M	G	V	R	S	F	A	I	Y	W	D	D	I	Q	D	K	S	A	A	K	H	A	Q	V	L	N	R	F	N	E	E	F	V	K	A	K	G	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G				S	S	B	T	T																		T									S	S																				T					S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	P	L	I	T	V	P	T	E	Y	D	T	G	A	M	V	S	N	G	Q	P	R	A	Y	T	R	I	F	A	E	T	V	D	P	S	I	E	V	M	W	T	G	P	G	V	V	T	N	E	I	P	L	S	D	A	Q	L	I	S	G	I	Y	N	R	N	M	A	V	W	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S			B					B	S	S	S	S	B											S		T	T	S						B	S	S	S	S		S		B													T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	Y	P	V	T	D	Y	F	K	G	K	L	A	L	G	P	M	H	G	L	D	K	G	L	N	Q	Y	V	D	F	F	T	V	N	P	M	E	H	A	E	L	S	K	I	S	I	H	T	A	A	D	Y	S	W	N	M	D	N	Y	D	Y	D	K	A	W	N	R	A	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			S	S		T	T	S								S	B		T	T	T	T	T	T										S		T	T	T	T													S		T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	M	L	Y	G	D	L	A	E	D	M	K	V	F	A	N	H	S	T	R	M	D	N	K	T	W	A	K	S	G	R	E	D	A	P	E	L	R	A	K	M	D	E	L	W	N	K	L	S	S	K	E	D	A	S	A	L	I	E	E	L	Y	G	E	F	A	R	M	E	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G										T	S						S	S	S				S			S	S															T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	C	N	N	L	K	A	N	L	P	E	V	A	L	E	E	C	S	R	Q	L	D	E	L	I	T	L	A	Q	G	D	K	A	S	L	D	M	I	V	A	Q	L	N	E	D	T	E	A	Y	E	S	A	K	E	I	A	Q	N	K	L	N	T	A	L	S	S	F	A	V	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																										T	T																						S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	K	V	A	Q	S	F	I	Q	E	A	L	S	F	D	L	T	L	I	N	P	R	T	V	K	I	T	A	S	S	E	E	T	S	G	E	N	A	P	A	S	F	A	S	D	G	D	M	N	T	F	W	H	S	K	W	S	S	P	A	H	E	G	P	H	H	L	T	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T														S					S							S			B		S	S	S	S	B		G	G	G	G	G	S	S		S	S								S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	D	N	V	Y	E	I	N	K	V	K	Y	A	P	R	Q	D	S	K	N	G	R	I	T	G	Y	K	V	S	V	S	L	D	G	E	N	F	T	E	V	K	T	G	T	L	E	D	N	A	A	I	K	F	I	E	F	D	S	V	D	A	K	Y	V	R	L	D	V	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S			T	T											S	S	S	S					S							S	S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.
Sequence	S	V	S	D	Q	A	N	G	R	G	K	F	A	T	A	A	E	V	N	V	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S	S		T	T	T					S

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PDB structure

FASTA sequence

Hidden Markov model

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