Fold library entry viewer: c2sliA_

Added to library: Tue Mar 16 13:46:51 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	P	E	G	I	L	M	E	K	N	N	V	D	I	A	E	G	Q	G	Y	S	L	D	Q	E	A	G	A	K	Y	V	K	A	M	T	Q	G	T	I	I	L	S	Y	K	S	T	S	E	N	G	I	Q	S	L	F	S	V	G	N	S	T	A	G	N	Q	D	R	H	F	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S												T	T	T					T	T	S	T	T					T	T		S	S														S											S	T	T		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	Y	I	T	N	S	G	G	I	G	I	E	L	R	N	T	D	G	V	F	N	Y	T	L	D	R	P	A	S	V	R	A	L	Y	K	G	E	R	V	F	N	T	V	A	L	K	A	D	A	A	N	K	Q	C	R	L	F	A	N	G	E	L	L	A	T	L	D	K	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S										T	T	T								S	S				S			T	T													T	T	T	T							T	T									S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	K	F	I	S	D	I	T	G	V	D	N	V	T	L	G	G	T	K	R	Q	G	K	I	A	Y	P	F	G	G	T	I	G	D	I	K	V	Y	S	N	A	L	S	D	E	E	L	I	Q	A	T	G	V	T	T	Y	G	E	N	I	F	Y	A	G	D	V	T	E	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	S	T	T							S	S				T	T				S													S	S												T	T				S	B		S	S		T	T	S	T	T			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Y	F	R	I	P	S	L	L	T	L	S	T	G	T	V	I	S	A	A	D	A	R	Y	G	G	T	H	D	S	K	S	K	I	N	I	A	F	A	K	S	T	D	G	G	N	T	W	S	E	P	T	L	P	L	K	F	D	D	Y	I	A	K	N	I	D	W	P	R	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S										S	S	T	T			S	S	S										S	S	T	T	S	S												S	B										S	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	G	K	N	V	Q	I	Q	G	S	A	S	Y	I	D	P	V	L	L	E	D	K	L	T	K	R	I	F	L	F	A	D	L	M	P	A	G	I	G	S	S	N	A	S	V	G	S	G	F	K	E	V	N	G	K	K	Y	L	K	L	R	W	H	K	D	A	G	R	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	G	G	G				S	S													T	T	T	T											T	T			G	G	G			S	S		S					T	T									T	T	S		T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	Y	T	I	R	E	K	G	V	I	Y	N	D	A	T	N	Q	P	T	E	F	R	V	D	G	E	Y	N	L	Y	Q	H	D	T	N	L	T	C	K	Q	Y	D	Y	N	F	S	G	N	N	L	I	E	S	K	T	D	V	D	V	N	M	N	I	F	Y	K	N	S	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G					T	T	T	T									T	T		B				T	T														T	T														B	T	T	S	T	T		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	A	F	P	T	N	Y	L	A	M	R	Y	S	D	D	E	G	A	S	W	S	D	L	D	I	V	S	S	F	K	P	E	V	S	K	F	L	V	V	G	P	G	I	G	K	Q	I	S	T	G	E	N	A	G	R	L	L	V	P	L	Y	S	K	S	S	A	E	L	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S									S	S	T	T	S	S								G	G	G			T	T		S						S								S	S	T	T	T	T										S	S		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	M	Y	S	D	D	H	G	D	N	W	T	Y	V	E	A	D	N	L	T	G	G	A	T	A	E	A	Q	I	V	E	M	P	D	G	S	L	K	T	Y	L	R	T	G	S	N	C	I	A	E	V	T	S	I	D	G	G	E	T	W	S	D	R	V	P	L	Q	G	I	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	T	T	S	S											S												T	T	S									S	S	S	S							S	S	T	T	S	S								T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	S	Y	G	T	Q	L	S	V	I	N	Y	S	Q	P	I	D	G	K	P	A	I	I	L	S	S	P	N	A	T	N	G	R	K	N	G	K	I	W	I	G	L	V	N	D	T	G	N	T	G	I	D	K	Y	S	V	E	W	K	Y	S	Y	A	V	D	T	P	Q	M	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S														T	T												S	S	S	S	B													S			G	G	G	S											S	S		T	T	S	B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.
Sequence	Y	S	Y	S	C	L	A	E	L	P	D	G	Q	V	G	L	L	Y	E	K	Y	D	S	W	S	R	N	E	L	H	L	K	D	I	L	K	F	E	K	Y	S	I	S	E	L	T	G	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S	S									S		S	S		T	T	S		S		S	S													T	T

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PDB structure

FASTA sequence

Hidden Markov model

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