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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2ruhA_

Fold library idPDB HeaderMoleculeTitle
c2ruhA_PDB header: peptide binding proteinChain: A: PDB Molecule: e3 ubiquitin-protein ligase mdm2;PDBTitle: chemical shift assignments for mip and mdm2 in bound state


Added to library: Sat Oct 18 08:23:32 2014
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence MPRFWEYWLRLMEGGGENLYFQGMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKE
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Known secondary structure (DSSP)


T

GGGS
SSSS










SSTT







TT


SS
 .........80.........90.........100.........110.........120.........130.
Sequence VLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMMASMTGGQQMG
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Known secondary structure (DSSP) T
B
SS
TT
SSSSSSTT
TSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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