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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2ro1A_

Fold library idPDB HeaderMoleculeTitle
c2ro1A_PDB header: transcriptionChain: A: PDB Molecule: transcription intermediary factor 1-beta;PDBTitle: nmr solution structures of human kap1 phd finger-bromodomain


Added to library: Tue Mar 16 14:33:30 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPDLKEEDGSLSLDGADSTGVV
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Known secondary structure (DSSP)



BTTT


SS



TTT

B

STTSTT

SS


TT

TTTTS
S

TT
S
SS

SSSSSSS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AKLSPANQRKCERVLLALFCHEPCRPLHQLATDSTFSLDQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQ
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Known secondary structure (DSSP)
SS
STTS
S

TT
SSS
SS



TSSSS

S
 .........150.........160.........170.........180.........
Sequence DVGRMFKQFNKLTEDKADVQSIIGLQRFFETRMNEAFGDTKFSAVLVEP
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Known secondary structure (DSSP)

SS
SSTTTS
S
TTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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