PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2rgyA_

Fold library id	PDB Header	Molecule	Title
c2rgyA_	PDB header: transcription regulator	Chain: A: PDB Molecule: transcriptional regulator, laci family;	PDBTitle: crystal structure of transcriptional regulator of laci2 family from burkhoderia phymatum

Links to external resources
Added to library: Tue Mar 16 14:41:34 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L G I I G L F V P T F F G S Y Y G T I L K Q T D L E L R A V H R H V V V A T G C G E S T P R E Q A L E A V R F L I G R D C D G V V V I S H D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
S T T
S S S
T T
S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L H D E D L D E L H R X H P K X V F L N R A F D A L P D A S F C P D H R R G G E L A A A T L I E H G H R K L A V I S G P F T A S D N V E R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S S
T T S G G G
T T
S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D G F F D E L A R H G I A R D S V P L I E S D F S P E G G Y A A T C Q L L E S K A P F T G L F C A N D T X A V S A L A R F Q Q L G I S V P G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
G G G S
S S T
S S S T T
T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . .

Sequence D V S V I G Y D D D Y S A A Y A A P A L T S V H I P T A E L T Q N A V R W L I N Q C Y G T K W E I F R E F P V T V S X R A S V A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S T T S S S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	G	I	I	G	L	F	V	P	T	F	F	G	S	Y	Y	G	T	I	L	K	Q	T	D	L	E	L	R	A	V	H	R	H	V	V	V	A	T	G	C	G	E	S	T	P	R	E	Q	A	L	E	A	V	R	F	L	I	G	R	D	C	D	G	V	V	V	I	S	H	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		S		S																	T	T										S	S	S																T	T		S							S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	H	D	E	D	L	D	E	L	H	R	X	H	P	K	X	V	F	L	N	R	A	F	D	A	L	P	D	A	S	F	C	P	D	H	R	R	G	G	E	L	A	A	A	T	L	I	E	H	G	H	R	K	L	A	V	I	S	G	P	F	T	A	S	D	N	V	E	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S													S	S					S	S			T	T	S	G	G	G																				T	T			S						S		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	G	F	F	D	E	L	A	R	H	G	I	A	R	D	S	V	P	L	I	E	S	D	F	S	P	E	G	G	Y	A	A	T	C	Q	L	L	E	S	K	A	P	F	T	G	L	F	C	A	N	D	T	X	A	V	S	A	L	A	R	F	Q	Q	L	G	I	S	V	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T			G	G	G	S							S	S															T				S					S	S														T	T			T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Sequence	D	V	S	V	I	G	Y	D	D	D	Y	S	A	A	Y	A	A	P	A	L	T	S	V	H	I	P	T	A	E	L	T	Q	N	A	V	R	W	L	I	N	Q	C	Y	G	T	K	W	E	I	F	R	E	F	P	V	T	V	S	X	R	A	S	V	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T										T	T	S	T	T	S	S	S																																											S	S