PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2rduA_

Fold library id	PDB Header	Molecule	Title
c2rduA_	PDB header: oxidoreductase	Chain: A: PDB Molecule: hydroxyacid oxidase 1;	PDBTitle: crystal structure of human glycolate oxidase in complex2 with glyoxylate

Links to external resources
Added to library: Tue Mar 16 14:22:58 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P R L I C I N D Y E Q H A K S V L P K S I Y D Y Y R S G A N D E E T L A D N I A A F S R W K L Y P R M L R N V A E T D L S T S V L G Q R V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T T
S
S S
T T
B
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence M P I C V G A T A M Q R M A H V D G E L A T V R A C Q S L G T G M M L S S W A T S S I E E V A E A G P E A L R W L Q L Y I Y K D R E V T K K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S
G G G T S T T T
T T
S S
T T S
B S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L V R Q A E K M G Y K A I F V T V D T P Y L G N R L D D V R N R F K L P P Q L R M K N F E T S T L S F S P E E N F G D D S G L A A Y V A K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S
T
T T
T T
S S T T T T T
T T S
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence I D P S I S W E D I K W L R R L T S L P I V A K G I L R G D D A R E A V K H G L N G I L V S N H G A R Q L D G V P A T I D V L P E I V E A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
T T
S
S T T
G G G T S S T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence E G K V E V F L D G G V R K G T D V L K A L A L G A K A V F V G R P I V W G L A F Q G E K G V Q D V L E I L K E E F R L A M A L S G C Q N V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S S S
S T T
S S T
S B G

. . . . . . . . . 360

Sequence K V I D K T L V R K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	R	L	I	C	I	N	D	Y	E	Q	H	A	K	S	V	L	P	K	S	I	Y	D	Y	Y	R	S	G	A	N	D	E	E	T	L	A	D	N	I	A	A	F	S	R	W	K	L	Y	P	R	M	L	R	N	V	A	E	T	D	L	S	T	S	V	L	G	Q	R	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S												S												S	T	T														S							S	S			T	T		B						T	T				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	P	I	C	V	G	A	T	A	M	Q	R	M	A	H	V	D	G	E	L	A	T	V	R	A	C	Q	S	L	G	T	G	M	M	L	S	S	W	A	T	S	S	I	E	E	V	A	E	A	G	P	E	A	L	R	W	L	Q	L	Y	I	Y	K	D	R	E	V	T	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S							S		G	G	G	T	S	T	T													T							T	T		S	S										T	T	S									B	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	V	R	Q	A	E	K	M	G	Y	K	A	I	F	V	T	V	D	T	P	Y	L	G	N	R	L	D	D	V	R	N	R	F	K	L	P	P	Q	L	R	M	K	N	F	E	T	S	T	L	S	F	S	P	E	E	N	F	G	D	D	S	G	L	A	A	Y	V	A	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T									S		S	S											T					T	T				T	T		S	S	T	T	T	T	T		T	T	S				S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	D	P	S	I	S	W	E	D	I	K	W	L	R	R	L	T	S	L	P	I	V	A	K	G	I	L	R	G	D	D	A	R	E	A	V	K	H	G	L	N	G	I	L	V	S	N	H	G	A	R	Q	L	D	G	V	P	A	T	I	D	V	L	P	E	I	V	E	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		T	T															S									S										T	T									G	G	G	T	S	S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	G	K	V	E	V	F	L	D	G	G	V	R	K	G	T	D	V	L	K	A	L	A	L	G	A	K	A	V	F	V	G	R	P	I	V	W	G	L	A	F	Q	G	E	K	G	V	Q	D	V	L	E	I	L	K	E	E	F	R	L	A	M	A	L	S	G	C	Q	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S						S	S			S										T	T		S					S																																		T		S	B	G
	.	.	.	.	.	.	.	.	.	360
Sequence	K	V	I	D	K	T	L	V	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G			G	G	G