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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2rdtA_

Fold library idPDB HeaderMoleculeTitle
c2rdtA_PDB header: oxidoreductaseChain: A: PDB Molecule: hydroxyacid oxidase 1;PDBTitle: crystal structure of human glycolate oxidase (go) in complex with cdst


Added to library: Wed Jan 9 17:21:02 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SMLPRLICINDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQ
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Known secondary structure (DSSP)

SS


SS


STT




SS

SS
B

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREV
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Known secondary structure (DSSP) SSS


S
GGGT
TTT

TT
SS
STTS

BS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGI
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Known secondary structure (DSSP) TT



S
SS



TT

B
TT



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGA
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Known secondary structure (DSSP)

TT



GGGTSSTT


TTSSSS

STT
 .........290.........300.........310.........320.........330.....
Sequence KAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVRKN
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Known secondary structure (DSSP) S
STT
SBGGG

GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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