PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2rd3A_

Fold library id	PDB Header	Molecule	Title
c2rd3A_	PDB header: hydrolase	Chain: A: PDB Molecule: transcriptional regulator;	PDBTitle: crystal structure of tena homologue (hp1287) from2 helicobacter pylori

Links to external resources
Added to library: Tue Mar 16 12:46:37 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D P F T M Q V S Q Y L Y Q N A Q S I W G D C I S H P F V Q G I G R G T L E R D K F R F Y I I Q D Y L F L L E Y A K V F A L G V V K A C D E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T S T S
S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V M R E F S N A I Q D I L N N E M S I H N H Y I R E L Q I T Q K E L Q N A C P T L A N K S Y T S Y M L A E G F K G S I K E V A A A V L S C G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T
S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence W S Y L V I A Q N L S Q I P N A L E H A F Y G H W I K G Y S S K E F Q A C V N W N I N L L D S L T L A S S K Q E I E K L K E I F I T T S E Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S T T T
T T T T T S T T

. . . . . . . . . 220 .

Sequence E Y L F W D M A Y Q S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	P	F	T	M	Q	V	S	Q	Y	L	Y	Q	N	A	Q	S	I	W	G	D	C	I	S	H	P	F	V	Q	G	I	G	R	G	T	L	E	R	D	K	F	R	F	Y	I	I	Q	D	Y	L	F	L	L	E	Y	A	K	V	F	A	L	G	V	V	K	A	C	D	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S																				T	S								T	S		S																																S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	M	R	E	F	S	N	A	I	Q	D	I	L	N	N	E	M	S	I	H	N	H	Y	I	R	E	L	Q	I	T	Q	K	E	L	Q	N	A	C	P	T	L	A	N	K	S	Y	T	S	Y	M	L	A	E	G	F	K	G	S	I	K	E	V	A	A	A	V	L	S	C	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T	T									T	T																													S									T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	W	S	Y	L	V	I	A	Q	N	L	S	Q	I	P	N	A	L	E	H	A	F	Y	G	H	W	I	K	G	Y	S	S	K	E	F	Q	A	C	V	N	W	N	I	N	L	L	D	S	L	T	L	A	S	S	K	Q	E	I	E	K	L	K	E	I	F	I	T	T	S	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T		S	S	S	T	T	T		T	T	T							T	T	S																			T	T
	.	.	.	.	.	.	.	.	.	220	.
Sequence	E	Y	L	F	W	D	M	A	Y	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)