PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2rasB_

Fold library id	PDB Header	Molecule	Title
c2rasB_	PDB header: transcription	Chain: B: PDB Molecule: transcriptional regulator, tetr family;	PDBTitle: crystal structure of predicted transcriptional regulator of2 tetr/acrr family (yp_495839.1) from novosphingobium3 aromaticivorans dsm 12444 at 1.80 a resolution

Links to external resources
Added to library: Tue Mar 16 12:04:57 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G T E H D A X R A R L V D V A Q A I V E E R G G A G L T L S E L A A R A G I S Q A N L S R Y F E T R E D L X E A I A D Y W F H P X V E I X E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T S
T T
S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D V L A S D L P P R R K X Y E F F A R R F V V X R R K W E A D P V K L Q T Y I E V G N D Y F E Q V R S Y I D L A D H Y L G E I I G E A X S D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . .

Sequence G A F S G L E V D E T I S L V N Q X C A P Y C A L N T X T T F X E R L S E D K L A R I V D A V F D G L S A Q D R G A R S L T G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S T T
S G G G T
G G G
S S S
S S S
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	T	E	H	D	A	X	R	A	R	L	V	D	V	A	Q	A	I	V	E	E	R	G	G	A	G	L	T	L	S	E	L	A	A	R	A	G	I	S	Q	A	N	L	S	R	Y	F	E	T	R	E	D	L	X	E	A	I	A	D	Y	W	F	H	P	X	V	E	I	X	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								G	G	G											T	S							T	T		S	S												T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	V	L	A	S	D	L	P	P	R	R	K	X	Y	E	F	F	A	R	R	F	V	V	X	R	R	K	W	E	A	D	P	V	K	L	Q	T	Y	I	E	V	G	N	D	Y	F	E	Q	V	R	S	Y	I	D	L	A	D	H	Y	L	G	E	I	I	G	E	A	X	S	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Sequence	G	A	F	S	G	L	E	V	D	E	T	I	S	L	V	N	Q	X	C	A	P	Y	C	A	L	N	T	X	T	T	F	X	E	R	L	S	E	D	K	L	A	R	I	V	D	A	V	F	D	G	L	S	A	Q	D	R	G	A	R	S	L	T	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S	T	T														S	G	G	G	T									G	G	G																		S	S	S			S	S	S		T	T	T