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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2r9vA_

Fold library idPDB HeaderMoleculeTitle
c2r9vA_PDB header: hydrolaseChain: A: PDB Molecule: atp synthase subunit alpha;PDBTitle: crystal structure of atp synthase subunit alpha (tm1612)2 from thermotoga maritima at 2.10 a resolution


Added to library: Tue Mar 16 13:33:00 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KSFEEKIDLEDTGKVIQVGDGIARAYGLNKVXVSELVEFVETGVKGVAFNLEEDNVGIIILGEYKDIKEG
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Known secondary structure (DSSP)
TT


S
TTTTT
TT

TTTTT



TT
S

TT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence HTVRRLKRIIEVPVGEELLGRVVNPLGEPLDGKGPINAKNFRPIEIKAPGVIYRKPVDTPLQTGIKAIDS
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Known secondary structure (DSSP)

SGGGTT

TTS
B
SSS




SS





GGGB



S

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence XIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGQGVYCIYVAIGQKKSAIARIIDKLRQYGAXEYTTVVV
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Known secondary structure (DSSP) S
TT
BTTSSTTTTTTS

TTGGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence ASASDPASLQYIAPYAGCAXGEYFAYSGRDALVVYDDLSKHAVAYRQLSLLXRRPPGREAYPGDIFYLHS
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Known secondary structure (DSSP)
TTS
TTT
TTS


TT






 .........290.........300.........310.........320.........330.........340.........350
Sequence RLLERAVRLNDKLGGGSLTALPIVETQANDISAYIPTNVISITDGQIYLEPGLFYAGQRPAINVGLSVSR
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Known secondary structure (DSSP) TT
B
TTTTS
STT
TTSTSSB
T
SS
B
TTT
G
 .........360.........370.........380.........390.........400.........410.........420
Sequence VGGSAQIKAXKQVAGXLRIDLAQYRELETFAQFATELDPATRAQIIRGQRLXELLKQEQYSPXPVEEQVV
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Known secondary structure (DSSP) GGTTTS
TTGGG
S


T


TT



 .........430.........440.........450.........460.........470.........480.......
Sequence VLFAGVRGYLDDLPVEEVRRFEKEFLRFXHEKHQDILDDIKTKKELTSETEEKLKKAIEEFKTTFRV
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Known secondary structure (DSSP) TTTTTTS
GGG
SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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