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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2r9uC_ | PDB header: immune system | Chain: C: PDB Molecule: variable lymphocyte receptor; | PDBTitle: crystal structure of lamprey variable lymphocyte receptor2 2913 ectodomain |
Added to library: Tue Mar 16 12:14:01 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | H | H | S | A | G | C | P | S | Q | C | S | C | D | Q | T | L | V | N | C | Q | N | I | R | L | A | S | V | P | A | G | I | P | T | D | K | Q | R | L | W | L | N | N | N | Q | I | T | K | L | E | P | G | V | F | D | H | L | V | N | L | Q | Q | L | Y | F | N | S | N | K | L | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | T | T | S | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | S | S | S | S | S | T | T | S | ![]() | ![]() | ![]() | S | S | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | A | I | P | T | G | V | F | D | K | L | T | Q | L | T | Q | L | D | L | N | D | N | H | L | K | S | I | P | R | G | A | F | D | N | L | K | S | L | T | H | I | Y | L | Y | N | N | P | W | D | C | E | C | R | D | I | M | Y | L | R | N | W | V | A | D | H | T | S | I | V | M | R |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S | T | T | T | T | T | T | T | T | S | ![]() | ![]() | ![]() | S | S | B | T | T | B | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
Sequence | W | D | G | K | A | V | N | D | P | D | S | A | K | C | A | G | T | N | T | P | V | R | A | V | T | E | A | S | T | S | P | S | K | C | ||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | S | S | S | ![]() | ![]() | ![]() | G | G | G | S | B | B | T | T | T | B | G | G | G | G | G | G | B | T | T |
Download: | PDB structure | FASTA sequence |
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