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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2r9rH_

Fold library idPDB HeaderMoleculeTitle
c2r9rH_PDB header: membrane protein, transport proteinChain: H: PDB Molecule: paddle chimera voltage gated potassium channelPDBTitle: shaker family voltage dependent potassium channel (kv1.2-2 kv2.1 paddle chimera channel) in association with beta3 subunit


Added to library: Tue Mar 16 13:58:21 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRP
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Known secondary structure (DSSP)

TTTSTTSTTT
GGGTTTT
S
TS




 .........80.........90.........100.........110.........120.........130.........140
Sequence VNVPLDIFSEEIRFYELGEEAMEMFREDEGFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLET
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Known secondary structure (DSSP) TTS
TT

T

TTT
TTS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LPIFRDEFHTYSQSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAII
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Known secondary structure (DSSP)
T

SS


TT


SS
SSSSTTSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence PYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIG
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Known secondary structure (DSSP) TS
STTGGGGGGGGGGS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence VILFSSAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPV
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Known secondary structure (DSSP) TT
TT
S
SSTT


SSS


STT
 .........360...
Sequence IVSNFNYFYHRET
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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