PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2r9aA_

Fold library id	PDB Header	Molecule	Title
c2r9aA_	PDB header: protein binding	Chain: A: PDB Molecule: non-homologous end-joining factor 1;	PDBTitle: crystal structure of human xlf

Links to external resources
Added to library: Tue Mar 16 13:56:46 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X E E L E Q G L L X Q P W A W L Q L A E N S L L A K V F I T K Q G Y A L L V S D L Q Q V W H E Q V D T S V V S Q R A K E L N K R L T A P P A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A F L C H L D N L L R P L L A T F S C D C V A D A L I L R V R S E L S G L P F Y W N F H C X L A S P S L V S Q H L I R P L X G X S L A L Q C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q V R E L A T L L H X K D L E I Q D Y Q E S G A T L I R D R L K T E P F E E N S F L E Q F X I E K L P E A C S I G D G K P F V X N L Q D L Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S T T
T T
T T S T T S

. . . . . . . . .

Sequence X A V T T Q H H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	E	E	L	E	Q	G	L	L	X	Q	P	W	A	W	L	Q	L	A	E	N	S	L	L	A	K	V	F	I	T	K	Q	G	Y	A	L	L	V	S	D	L	Q	Q	V	W	H	E	Q	V	D	T	S	V	V	S	Q	R	A	K	E	L	N	K	R	L	T	A	P	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T											T	T									S	S																					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	F	L	C	H	L	D	N	L	L	R	P	L	L	A	T	F	S	C	D	C	V	A	D	A	L	I	L	R	V	R	S	E	L	S	G	L	P	F	Y	W	N	F	H	C	X	L	A	S	P	S	L	V	S	Q	H	L	I	R	P	L	X	G	X	S	L	A	L	Q	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	T										T	T											T	T																					T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	V	R	E	L	A	T	L	L	H	X	K	D	L	E	I	Q	D	Y	Q	E	S	G	A	T	L	I	R	D	R	L	K	T	E	P	F	E	E	N	S	F	L	E	Q	F	X	I	E	K	L	P	E	A	C	S	I	G	D	G	K	P	F	V	X	N	L	Q	D	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	T	T						S	T	T																		T					T			T	T	S	T	T					S
	.	.	.	.	.	.	.	.	.
Sequence	X	A	V	T	T	Q	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T