Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2r7cA_

Fold library idPDB HeaderMoleculeTitle
c2r7cA_PDB header: rna binding proteinChain: A: PDB Molecule: non-structural rna-binding protein 35;PDBTitle: crystallographic and biochemical analysis of rotavirus nsp22 with nucleotides reveals an ndp kinase like activity


Added to library: Tue Mar 16 13:40:54 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AELACFCYPHLENDSYKFIPFNNLAIKAMLTAKVDKKDMDKFYDSIIYGIAPPPQFKKRYNTNDNSRGMN
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)
BGGGT
SSS

T



TTSSSS

SSS


GGGGGGB
BTTBSSSB
 .........80.........90.........100.........110.........120.........130.........140
Sequence FETIMFTKVAMLICEALNSLKVTQANVSNVLSRVVSIRHLENLVIRKENPQDILFHSKDLLLKSTLIAIG
Predicted secondary structure



SS confidence





































































Known secondary structure (DSSP) TTSTT
B
TTTT
B

T
TTSGGGT
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QSKEIETTITAEGGEIVFQNAAFTMWKLTYLEHQLMPILDQNFIEYKVTLNEDKPISDVHVKELVAELRW
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)

SS


GGG




SS
TTS
SSS

S
TT

SSSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence QYNKFAVITHGKGYRIVKYSSVANHADRVYATFKSNVKNDFNLLDQRIIWQNWYAFTSSMKQGNTLDVCK
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)
TT

S


GGGTT








TTTS
TT

 .........290.........300.......
Sequence RLLFQKMKPEKNPFKGLSTDRKMDEVS
Predicted secondary structure

















SS confidence


























Known secondary structure (DSSP) TTSS






TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D