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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2r70A_

Fold library idPDB HeaderMoleculeTitle
c2r70A_PDB header: transferaseChain: A: PDB Molecule: infectious bursal virus vp1 polymerase;PDBTitle: crystal structure of infectious bursal disease virus vp12 polymerase, cocrystallized with an oligopeptide mimicking3 the vp3 c-terminus.


Added to library: Tue Mar 16 13:02:02 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DVEELLIPKVWVPPEDPLASPSRLAKFLRENGYKVLQPRSLPENEEYETDQILPDLAWMRQIVLKPTLSL
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Known secondary structure (DSSP)




SS








TT
STT

B





GGGT



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence PIGDQEYFPKYYPTHRPSKEKPNAYPPDIALLKQMIYLFLQVPEANEGLKDEVTLLTQNIRDKAYGSGTY
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Known secondary structure (DSSP)


B



SS
SSSTTSS


SSS




 .........150.........160.........170.........180.........190.........200.........210
Sequence MGQANRLVAMKEVATGRNPNKDPLKLGYTFESIAQLLDITLPVGPPVPLTRVPSRMLVLTGEVEDYLPKI
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Known secondary structure (DSSP) TSS



GGGGT

S






B
S
GGGG







 .........220.........230.........240.........250.........260.........270.........280
Sequence NLKSSSGLPYVGRTKGETIGEMIAISNQFLRELSTLLKQGAGTKGSNKKKLLSMLSDYWYLSCGLLFPKA
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Known secondary structure (DSSP)
TTSB

TT
TT
BGGG

S
SSS
TTTTTGGGG

 .........290.........300.........310.........320.........330.........340.........350
Sequence ERYDKSTWLTKTRNIWSAPSPTHLMISMITWPVMSNSPNNVLNIEGCPSLYKFNPFRGGLNRIVEWILAP
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Known secondary structure (DSSP) GGGTTT




TT


STTTSTT

B
TT

STTTSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence EEPKALVYADNIYIVHSNTWYSIDLEKGEANCTRQHMQAAMYYILTRGWSDNGDPMFNQTWATFAMNIAP
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Known secondary structure (DSSP)

STTTTTT

STT
B
T
 .........430.........440.........450.........460.........470.........480.........490
Sequence ALVVDSSCLIMNLQIKTYGQGSGNAATFINNHLLSTLVLDQWNLMRQPRPDSEEFKSIEDKLGINFKIER
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Known secondary structure (DSSP) BS
BT

SB
TTSTTTT


TTSTT

 .........500.........510.........520.........530.........540.........550.........560
Sequence SIDDIRGKLRQLVLLAQPGYLSGGVEPEQSSPTVELDLLGWSATYSKDLGIYVPVLDKERLFCSAAYPKG
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Known secondary structure (DSSP) SS

SBTTBBS


SS



TTTTTT
S


 .........570.........580.........590.........600.........610.........620.........630
Sequence VEVGIEQAYKVVRYEALRLVGGWNYPLLNKACKNNAGAARRHLEAKGFPLDEFLAEWSELSEFGEAFEGF
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Known secondary structure (DSSP)



TGGGSTTT

TTTGGGGSTTGGGGTTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence NIKLTVTSESLAELNKPVPPKPPNVNRPVNTGGLKAVSNALKTGRYRNEAGLSGLVLLATARSRLQDAVK
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Known secondary structure (DSSP)


S


S








SS



S
TTT

B
TT
B
GGG
 .........710.........720.........730.........740.........750..
Sequence AKAEAEKLHKSKPDADWFERSETLSDLLEKADIASKVAHSALVETSDALEAV
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Known secondary structure (DSSP) T



BTT
B

TT

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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