PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2r6oB_

Fold library id	PDB Header	Molecule	Title
c2r6oB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: putative diguanylate cyclase/phosphodiesterase	PDBTitle: crystal structure of putative diguanylate2 cyclase/phosphodiesterase from thiobacillus denitrificans

Links to external resources
Added to library: Tue Mar 16 12:05:09 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L T L D T R L R Q A L E R N E L V L H Y Q P I V E L A S G R I V G G E A L V R W E D D T G L I V A L S D W V L E A C C T Q L R A W Q Q Q G R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A A D D L T L S V N I S T R Q F E G E H L T R A V D R A L A R S G L R P D C L E L E I T E N V X L V X T D E V R T C L D A L R A R G V R L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
G G G G S T T
G G G G G G G G G
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L D D F G T G Y S S L S Y L S Q L P F H G L K I D Q S F V R K I P A H P S E T Q I V T T I L A L A R G L G X E V V A E G I E T A Q Q Y A F L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
S
T T T T T
T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . .

Sequence R D R G C E F G Q G N L X S T P Q A A D A F A S L L D R Q K A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	T	L	D	T	R	L	R	Q	A	L	E	R	N	E	L	V	L	H	Y	Q	P	I	V	E	L	A	S	G	R	I	V	G	G	E	A	L	V	R	W	E	D	D	T	G	L	I	V	A	L	S	D	W	V	L	E	A	C	C	T	Q	L	R	A	W	Q	Q	Q	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T												T	T	T	T																																							T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	A	D	D	L	T	L	S	V	N	I	S	T	R	Q	F	E	G	E	H	L	T	R	A	V	D	R	A	L	A	R	S	G	L	R	P	D	C	L	E	L	E	I	T	E	N	V	X	L	V	X	T	D	E	V	R	T	C	L	D	A	L	R	A	R	G	V	R	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T									G	G	G	G	S	T	T																	G	G	G							G	G	G	G	G	G															T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	D	D	F	G	T	G	Y	S	S	L	S	Y	L	S	Q	L	P	F	H	G	L	K	I	D	Q	S	F	V	R	K	I	P	A	H	P	S	E	T	Q	I	V	T	T	I	L	A	L	A	R	G	L	G	X	E	V	V	A	E	G	I	E	T	A	Q	Q	Y	A	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	S	S										S													T	T	T	T	T																			T										S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Sequence	R	D	R	G	C	E	F	G	Q	G	N	L	X	S	T	P	Q	A	A	D	A	F	A	S	L	L	D	R	Q	K	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T							T	T	T