PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2r1fB_

Fold library id	PDB Header	Molecule	Title
c2r1fB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: predicted aminodeoxychorismate lyase;	PDBTitle: crystal structure of predicted aminodeoxychorismate lyase2 from escherichia coli

Links to external resources
Added to library: Tue Mar 16 13:22:50 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H F K A G T Y R F T P Q X T V R E X L K L L E S G K E A Q F P L R L V E G X R L S D Y L K Q L R E A P Y I K H T L S D D K Y A T V A Q A L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
T T
S T T
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L E N P E W I E G W F W P D T W X Y T A N T T D V A L L K R A H K K X V K A V D S A W E G R A D G L P Y K D K N Q L V T X A S I I E K E T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T
T T
S
T T T
S S
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V A S E R D Q V A S V F I N R L R I G X R L Q T D P T V I Y G X G E R Y N G K L S R A D L E T P T A Y N T Y T I T G L P P G A I A T P G A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T
G G G
S
S
T T
T T T S S S
S S
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260

Sequence S L K A A A H P A K T P Y L Y F V A D G K G G H T F N T N L A S H N K S V Q D Y L K V L K E K N A Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S S S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	F	K	A	G	T	Y	R	F	T	P	Q	X	T	V	R	E	X	L	K	L	L	E	S	G	K	E	A	Q	F	P	L	R	L	V	E	G	X	R	L	S	D	Y	L	K	Q	L	R	E	A	P	Y	I	K	H	T	L	S	D	D	K	Y	A	T	V	A	Q	A	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S						T	T																								T	T													S	T	T						S	S										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	E	N	P	E	W	I	E	G	W	F	W	P	D	T	W	X	Y	T	A	N	T	T	D	V	A	L	L	K	R	A	H	K	K	X	V	K	A	V	D	S	A	W	E	G	R	A	D	G	L	P	Y	K	D	K	N	Q	L	V	T	X	A	S	I	I	E	K	E	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	T	T			T	T		S									T	T																								T			S	S				S	S														S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	A	S	E	R	D	Q	V	A	S	V	F	I	N	R	L	R	I	G	X	R	L	Q	T	D	P	T	V	I	Y	G	X	G	E	R	Y	N	G	K	L	S	R	A	D	L	E	T	P	T	A	Y	N	T	Y	T	I	T	G	L	P	P	G	A	I	A	T	P	G	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G															T														G	G	G			S									S			T	T		T	T	T	S	S	S			S	S		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Sequence	S	L	K	A	A	A	H	P	A	K	T	P	Y	L	Y	F	V	A	D	G	K	G	G	H	T	F	N	T	N	L	A	S	H	N	K	S	V	Q	D	Y	L	K	V	L	K	E	K	N	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S													S	S	S	S					S	S