Fold library entry viewer: c2qzvB_

Added to library: Wed Jan 9 15:53:09 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	C	G	C	P	C	G	C	G	A	M	A	T	E	E	A	I	I	R	I	P	P	Y	H	Y	I	H	V	L	D	Q	N	S	N	V	S	R	V	E	V	G	P	K	T	Y	I	R	Q	D	N	E	R	V	L	F	A	P	V	R	M	V	T	V	P	P	R	H	Y	C	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S									T	T								G	G	G								S									S	S							S	S							S	S									T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	A	N	P	V	S	R	D	T	Q	S	S	V	L	F	D	I	T	G	Q	V	R	L	R	H	A	D	Q	E	I	R	L	A	Q	D	P	F	P	L	Y	P	Q	V	V	L	P	N	T	A	L	H	L	K	A	L	L	D	F	E	D	K	N	G	D	K	V	M	A	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B	B			T	T	T			B			T	T	S	S												B			T	T			B							T	T							S	S	S		B			S	S	S			B	S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	W	L	F	E	G	P	G	T	Y	I	P	Q	K	E	V	E	V	V	E	I	I	Q	A	T	V	I	K	Q	N	Q	A	L	R	L	R	A	R	K	E	C	F	D	R	E	G	K	G	R	V	T	G	E	E	W	L	V	R	S	V	G	A	Y	L	P	A	V	F	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					S								S	S		S	S	S					S					S	S		B												S	S	S		S	S											S	S					B	T	T	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	L	D	L	V	D	A	V	I	L	T	E	K	T	A	L	H	L	R	A	L	Q	N	F	R	D	L	R	G	V	L	H	R	T	G	E	E	W	L	V	T	V	Q	D	T	E	A	H	V	P	D	V	Y	E	E	V	L	G	V	V	P	I	T	T	L	K	S	F	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S			B							S	S							T	T						S	S							S	S									S	S						S	S	S		S	S					T	T	T			B	T	T	B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	P	G	E	R	L	E	R	G	I	Q	D	V	Y	V	L	S	E	Q	Q	G	L	L	L	K	A	L	Q	P	L	E	E	G	E	S	E	E	K	V	S	H	Q	A	G	D	C	W	L	I	R	G	P	L	E	Y	V	P	S	A	K	V	E	V	V	E	E	R	Q	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T						B			S	S										T	S	S			S														T	S	S	S		S	S		S										T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	L	D	Q	N	E	G	I	Y	V	Q	D	V	K	T	G	K	V	R	A	V	I	G	S	T	Y	M	L	T	Q	D	E	V	L	W	E	K	E	L	P	S	G	V	E	E	L	L	N	L	G	H	D	P	L	A	D	R	G	Q	K	G	T	A	K	P	L	Q	P	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S							S	S	S		S							S	S	S											S		G	G	G	T								T									T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	P	R	N	K	T	R	V	V	S	Y	R	V	P	H	N	A	A	V	Q	V	Y	D	Y	R	A	K	R	A	R	V	V	F	G	P	E	L	V	T	L	D	P	E	E	Q	F	T	V	L	S	L	S	A	G	R	P	K	R	P	H	A	R	R	A	L	C	L	L	L	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S				B						S	T	T							B		S	S	S									T	T																T	T	T	T	T		S	S									T	T	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	F	F	T	D	V	I	T	I	E	T	A	D	H	A	R	L	Q	L	Q	L	A	Y	N	W	H	F	E	L	K	N	R	N	D	P	A	E	A	A	K	L	F	S	V	P	D	F	V	G	D	A	C	K	A	I	A	S	R	V	R	G	A	V	A	S	V	T	F	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S						S	S								G	G	G	T																T	S	S		S																			T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	H	K	N	S	A	R	I	I	R	M	A	V	F	G	F	E	M	S	E	D	T	G	P	D	G	T	L	L	P	K	A	R	D	Q	A	V	F	P	Q	N	G	L	V	V	S	S	V	D	V	Q	S	V	E	P	V	D	Q	R	T	R	D	A	L	Q	R	S	V	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T						G	G	G	S									T	T	S						S	S							T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	I	E	I	T	T	N	S	Q	E	A	A	A	K	H	E	A	Q	R	L	E	Q	E	A	R	G	R	L	E	R	Q	K	I	L	D	Q	S	E	A	E	K	A	R	K	E	L	L	E	L	E	A	M	S	M	A	V	E	S	T	G	N	A	K	A	E	A	E	S	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S		T														T	T	T	S																																			S		S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.
Sequence	E	A	A	R	I	E	G	E	G	S	V	L	Q	A	K	L	K	A	Q	A	L	A	I	E	T	E	A	E	L	E	R	V	K	K	V	R	E	M	E	L	I	Y	A	R	A	Q	L	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		S																					T	T											G	G	G	G	G	G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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